CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_DESDG (Ribosome-recycling factor OS=Desulfovibrio desulfuricans (strain G20) GN=frr PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.458e-36 Identity = 68/147 (46.26%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + + RME+ + + F +RTGR++ +++D I+V+YYG+P + +A + PDS ++ IQP+D+ + +EKAI+ SDLG+TP NDG++IR+++P LT ERRKEL KV K E+ KVAVRNIRRDA + +K++K+K ++ED++K Sbjct: 7 ETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSRTITIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTEDAKVAVRNIRRDANEQIKKMEKDKAITEDDMK 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_THETN (Ribosome-recycling factor OS=Thermoanaerobacter tengcongensis GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 72/147 (48.98%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 D + RM++T++++++ ++R GR+NPA+LD+I V YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL LP+LT ERRKEL K+V K+AEE ++AVR IRRDA +K++K+ ++SED K Sbjct: 7 DSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVLVVQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEARIAVRQIRRDANDLVKKMEKDGEISEDERK 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LAWIP (Ribosome-recycling factor OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 71/147 (48.30%), Postives = 107/147 (72.79%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 D + RM + I + F +RTGR++ +++D I+V+YYG+P + +A I PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+ K E+ K+A+RNIRRDA + ++L+K K +SED +K Sbjct: 11 DSQERMVKAITSLEKEFTKLRTGRASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIRNIRRDANEQLKRLEKNKFISEDELK 157
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LACDA (Ribosome-recycling factor OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 73/147 (49.66%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I PYDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+AVRN+R++A+KA +K +K+ +++ED + L Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVRNVRQEAMKALKKQEKDGEITEDEERRL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 71/145 (48.97%), Postives = 105/145 (72.41%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 K +M++ + +VR GR+N +L+K+ V+YYG + +A I+ P++ L+IQPYDKS +K +EKAI++SDLG+TP+NDG VIRL +P LT ERR+EL+K+V K +EE KVAVRNIRRDA +KL+K +++ED ++ Sbjct: 10 KEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CLOK5 (Ribosome-recycling factor OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 71/143 (49.65%), Postives = 105/143 (73.43%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 +M +T+D++ S++ GR+NPA+LDKIEVEYYG+ + +A I+ P++ L IQP+DKS+LKSIEKAI+ SDLG+ P+NDGE+IRL +P+LT E RK + K + K E+ KVA+R IRR+ ++ L+K+ +SED +K Sbjct: 12 KMNKTVDVLVKELASMKAGRANPAILDKIEVEYYGAMTPISQLAGISIPEARILAIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSKVAIRGIRRECNDKFKALKKKNDISEDEIK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CLOK1 (Ribosome-recycling factor OS=Clostridium kluyveri (strain NBRC 12016) GN=frr PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.210e-36 Identity = 71/143 (49.65%), Postives = 105/143 (73.43%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 +M +T+D++ S++ GR+NPA+LDKIEVEYYG+ + +A I+ P++ L IQP+DKS+LKSIEKAI+ SDLG+ P+NDGE+IRL +P+LT E RK + K + K E+ KVA+R IRR+ ++ L+K+ +SED +K Sbjct: 12 KMNKTVDVLVKELASMKAGRANPAILDKIEVEYYGAMTPISQLAGISIPEARILAIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSKVAIRGIRRECNDKFKALKKKNDISEDEIK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LEPIN (Ribosome-recycling factor OS=Leptospira interrogans GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 70/148 (47.30%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSV 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LEPIC (Ribosome-recycling factor OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 70/148 (47.30%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSV 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LEPBL (Ribosome-recycling factor OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 71/148 (47.97%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +K +M++TID+V+ +F +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+K+V ++EE KVA+RNIRRDA++ +K + LS+D +K + Sbjct: 10 MKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKIVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGLSQDEIKTI 155 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |