CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_LEPBJ (Ribosome-recycling factor OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 71/148 (47.97%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 347 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +K +M++TID+V+ +F +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+K+V ++EE KVA+RNIRRDA++ +K + LS+D +K + Sbjct: 10 MKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKIVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGLSQDEIKTI 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_HALOH (Ribosome-recycling factor OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 66/145 (45.52%), Postives = 112/145 (77.24%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDN 778 + K +ME+ ++ + + N+VRTGR+ P++++ I V+YYG+ ++ +A++ P++ L+I+P+DKS ++SIEKAI+ S+LG+ P+NDG VIR+ +PQLT ERRKEL KV ++AE+G++A+RNIRR+A ++++K ++SEDN Sbjct: 8 NAKQKMEKVLEATKHDLNTVRTGRARPSLVENIMVDYYGTQTPIQQMAKVVAPEARQLVIEPWDKSVIESIEKAILKSNLGLNPSNDGNVIRINIPQLTEERRKELVKVAHEKAEKGRIAIRNIRREANDELKEMEKNSEISEDN 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_BDEBA (Ribosome-recycling factor OS=Bdellovibrio bacteriovorus GN=frr PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.193e-36 Identity = 77/147 (52.38%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + +A+ME+T++ + VRTGR+ +MLD I V YYG+P L +A I+TPD+ S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AEE +VAVR RRDA +KLQK+K +SED K Sbjct: 9 NAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARVAVRMARRDANDEVKKLQKDKAVSEDEGK 155
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_DEHSC (Ribosome-recycling factor OS=Dehalococcoides sp. (strain CBDB1) GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.476e-36 Identity = 68/143 (47.55%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 +M ++D++ + +RTGRS+PA+++ I VEY G P + +A I+ PD + IQP+D+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V K+ EE K+A+RN+RRDA+ +KL+K K++S+D++K Sbjct: 12 KMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNVRRDAMDEMKKLEKAKEISQDDLK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_DEHE1 (Ribosome-recycling factor OS=Dehalococcoides ethenogenes (strain 195) GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.476e-36 Identity = 68/143 (47.55%), Postives = 107/143 (74.83%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 +M ++D++ + +RTGRS+PA+++ I+VEY G P + +A I PD + IQP+D+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V+K+ EE K+A+RN+RRDA+ +KL+K K++S+D++K Sbjct: 12 KMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDKIAMRNVRRDAMDEMKKLEKSKEISQDDLK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CLOAB (Ribosome-recycling factor OS=Clostridium acetobutylicum GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.476e-36 Identity = 71/147 (48.30%), Postives = 107/147 (72.79%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 +++ +M ++I ++ S++ GR+NPAMLD+IEV+YYG+ L +A I+ P+S L+IQP+DKS++KSIEKAI+ SDLG+ P+NDG +RL +P+LT E RK + K V K E+GKVA+R IRRDA + L+K+ ++ED +K Sbjct: 8 ELEEKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPESRVLMIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGEDGKVALRAIRRDANDKVKSLKKDNSITEDEMK 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRTD (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRT2 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRT1 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain CNRZ 1066) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTL 156
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPZ (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36 Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +K K+++ED +K L Sbjct: 10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |