CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LEGPC (Ribosome-recycling factor OS=Legionella pneumophila (strain Corby) GN=frr PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.774e-41 Identity = 78/167 (46.71%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D + RM++TI+ + T+ + +RTGR+N ++LD + V+YYGSP L +A I T DS ++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E+G+V++RNIRRDA ++L KEK +SED+ + + +QKLTD Y+ ++D++ Sbjct: 8 DSEKRMKKTIEALHTDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRVSIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAV 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLOBL (Ribosome-recycling factor OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=frr PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.774e-41 Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRS7 (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=frr PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.235e-41 Identity = 81/163 (49.69%), Postives = 116/163 (71.17%), Query Frame = -3 Query: 185 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 673 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E KV++RNIRRDA+ +K +K K+++ED +K L D+QK TDE +K+ID Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEID 172
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STREM (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=frr PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.235e-41 Identity = 81/163 (49.69%), Postives = 116/163 (71.17%), Query Frame = -3 Query: 185 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 673 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E KV++RNIRRDA+ +K +K K+++ED +K L D+QK TDE +K+ID Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEID 172
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRE4 (Ribosome-recycling factor OS=Streptococcus equi subsp. equi (strain 4047) GN=frr PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.235e-41 Identity = 81/163 (49.69%), Postives = 116/163 (71.17%), Query Frame = -3 Query: 185 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 673 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E KV++RNIRRDA+ +K +K K+++ED +K L D+QK TDE +K+ID Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEID 172
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SYNFM (Ribosome-recycling factor OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=frr PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.143e-41 Identity = 77/168 (45.83%), Postives = 122/168 (72.62%), Query Frame = -3 Query: 176 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 679 D + RM + +D + T++ +RTGR++ +++D I EYYG+P +L +A I P+ +++IQP+D S + IEK+I+ S+LG+TP +DG+VIR+ +P LT++RR+EL KVV K +EE KVAVRNIRRD + + L+KEK++SED + Q++TD+++KKID +Y Sbjct: 8 DARDRMSKALDNLETDYKRLRTGRASVSLVDGIRAEYYGTPTALNQLATITIPEPRTIMIQPWDTSVIGEIEKSILKSELGLTPMSDGKVIRINIPVLTADRRRELVKVVKKMSEESKVAVRNIRRDVNEMIKDLKKEKEISEDEQFKAQEETQRITDDFIKKIDVVY 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACLA (Ribosome-recycling factor OS=Lactococcus lactis subsp. lactis GN=frr PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.143e-41 Identity = 76/163 (46.63%), Postives = 119/163 (73.01%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 RM++++ ++ + +R GR+N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEKA+ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D + Sbjct: 12 RMKQSLGSLQRDLGHIRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENNIQKVTDDAVKEADRL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_IDILO (Ribosome-recycling factor OS=Idiomarina loihiensis GN=frr PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.143e-41 Identity = 79/169 (46.75%), Postives = 122/169 (72.19%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D K RME++++ +R+ + VRTGR++P++LD + V YYG+ LK +A I T DS +L + +DKS+ ++EKAI++SDLG+ P + G VIR+ LP LT ERR++L K+V +AE G++AVRNIRRDA + L KEK+++ED ++ ++QKLTD+++K+ID K Sbjct: 8 DAKDRMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGTDTPLKQLANITTEDSRTLALTVFDKSASAAVEKAIINSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRAEAENGRIAVRNIRRDANGDIKDLLKEKEITEDEERNAEEEIQKLTDKFVKQIDEALK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRA5 (Ribosome-recycling factor OS=Streptococcus agalactiae serotype V GN=frr PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.063e-40 Identity = 79/163 (48.47%), Postives = 114/163 (69.94%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 R E++ + F +R GR+N ++LD+I+VEYYG+P L +A I P++ LLI P+DKSS+K IE+AI SDLG+ P NDG VIRL +P LT E R++L+K V K E K+A+RNIRRDA+ +K +K K+++ED++K L D+QK TD+ +K ID + Sbjct: 12 RFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRA3 (Ribosome-recycling factor OS=Streptococcus agalactiae serotype III GN=frr PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.063e-40 Identity = 79/163 (48.47%), Postives = 114/163 (69.94%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 R E++ + F +R GR+N ++LD+I+VEYYG+P L +A I P++ LLI P+DKSS+K IE+AI SDLG+ P NDG VIRL +P LT E R++L+K V K E K+A+RNIRRDA+ +K +K K+++ED++K L D+QK TD+ +K ID + Sbjct: 12 RFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEM 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |