CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_PROMS (Ribosome-recycling factor OS=Prochlorococcus marinus (strain AS9601) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 83/166 (50.00%), Postives = 127/166 (76.51%), Query Frame = -3 Query: 182 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 679 +++ M ++I+ + NFN++RTGR+N ++LD++ VEYYG+ +KS+A I+T DS ++ IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RNIRRDA+ +K +K+ +S D +D S++QK+TD+Y+ I++ Sbjct: 5 EIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTISIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIET 170
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LISMO (Ribosome-recycling factor OS=Listeria monocytogenes GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 173 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 673 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ D+QKLTDE +K IDSI K Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LISMH (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 173 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 673 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ D+QKLTDE +K IDSI K Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKSGDITEDDLRSYGEDVQKLTDESIKNIDSITK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LISMF (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain F2365) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 173 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 673 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ D+QKLTDE +K IDSI K Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LISMC (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 173 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 673 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KVAVRNIRR+A + +KL+K ++ED+++ D+QKLTDE +K IDSI K Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACS1 (Ribosome-recycling factor OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + + +M + D +R ++R GR+N ++L++I VEYYG+P L +AQI+ P++ LL+ PYDK+SLK+IE AI++SDLG+ P NDG IRL +PQLT ERRKEL+K V +E GKVAVRNIRRD + A +K QK L+ED+++DL + QK+TDE +K ID I Sbjct: 10 EAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVLLVTPYDKTSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGKVAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDKI 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_ALKOO (Ribosome-recycling factor OS=Alkaliphilus oremlandii (strain OhILAs) GN=frr PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 82/167 (49.10%), Postives = 124/167 (74.25%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 +++ +M +TI+ ++ S+R GR+NPAMLD+I VEYYGSP +K IA I P+ + IQPYD S+L SIEKAI+ SDLG+ P+NDG++IR+ +PQLT ERRKEL+KV K +E+ KV +RN RR+A +K+QK+ +++ED +K ++QK+TD+++K +D + Sbjct: 8 NLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRIISIQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDAKVVLRNERRNANDRLKKMQKDNEITEDELKTAQDEVQKITDKFIKMVDEL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SYMTH (Ribosome-recycling factor OS=Symbiobacterium thermophilum GN=frr PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.342e-43 Identity = 82/167 (49.10%), Postives = 125/167 (74.85%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D + RM++ +++ R +R R+ PA+LDK+ VE YGS V + ++A I PD +L+I+P+D+S +K+IE+AI +SDLG+ P NDG+VIRL++P +T ERR+EL KVVAK+ EE +VA+RNIRRDA + +KL+K+K +SED K ++QKLTD+Y+K++D + Sbjct: 8 DAEERMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTLVIKPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQRVAIRNIRRDANEQIKKLEKDKAVSEDESKRAQDEVQKLTDKYIKEVDQL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RUBXD (Ribosome-recycling factor OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=frr PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.342e-43 Identity = 83/165 (50.30%), Postives = 124/165 (75.15%), Query Frame = -3 Query: 185 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 679 D + RM+ ++ VR F ++RTGR+NPA+LD+IEVE YG+ + +KS+A I P+ L I PYD + LK+IE+AI SDLG+ P NDG++IRL +P+LT ERR+EL ++V AEEG+V+VRN+RRD + ++L++E ++SED+ + ++LQKLTD Y+K+ID Sbjct: 9 DAERRMKGALEAVRHQFATIRTGRANPALLDRIEVEAYGTRMPIKSVASIGAPEPRLLTITPYDPNLLKTIERAIRDSDLGLNPQNDGKIIRLPIPELTEERRRELIRLVRHMAEEGRVSVRNVRRDEMHDIQRLRREGEISEDDERRAEAELQKLTDAYIKRID 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_HELMI (Ribosome-recycling factor OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=frr PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.342e-43 Identity = 81/167 (48.50%), Postives = 124/167 (74.25%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + + +M++T++ +R + +R GR+NPA+L+K+ VEYYG+P + +A I+ P++ L+IQP+DKS L ++EKAI+ SDLG+TP +DG VIRL +PQLT ERR EL K V K+AEE +V +RN+RRDA + + LQKE +SED K ++QKLTD+Y++++D + Sbjct: 8 ETEDKMKKTVEALRKEYQHIRAGRANPALLEKVTVEYYGAPTPVNQLANISAPEARLLVIQPWDKSVLPALEKAILKSDLGLTPTSDGAVIRLVIPQLTQERRSELVKTVKKRAEEHRVILRNLRRDANEDVKDLQKEHIISEDEGKRAQEEIQKLTDKYIREVDQV 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |