CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SALPA (Ribosome-recycling factor OS=Salmonella paratyphi A GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 73/166 (43.98%), Postives = 116/166 (69.88%), Query Frame = -3 Query: 182 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 679 D + RME+ ++ +T + VRTGR++P++LD I VEYYG+ L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G I + LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 8 DAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDICVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_MYCLE (Ribosome-recycling factor OS=Mycobacterium leprae GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 69/169 (40.83%), Postives = 111/169 (65.68%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D + +ME+ + + R + + +RTGR+NP M ++ ++YYGS + +A IN P++ ++I+PYD L +IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV+VRNIRR ++ +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 8 DAEEKMEKAVSVAREDLSMIRTGRANPGMFSRLVIDYYGSATPITQLASINVPEARLVVIKPYDAIQLHAIETAIRNSDLGVNPSNDGTLIRVAVPQLTEERRRELVKQAKCKGEDAKVSVRNIRRKVMEELHRIRKDGEAGEDEVSRAEKDLDKTTHQYVIQIDELVK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_MYCLB (Ribosome-recycling factor OS=Mycobacterium leprae (strain Br4923) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 69/169 (40.83%), Postives = 111/169 (65.68%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D + +ME+ + + R + + +RTGR+NP M ++ ++YYGS + +A IN P++ ++I+PYD L +IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV+VRNIRR ++ +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 8 DAEEKMEKAVSVAREDLSMIRTGRANPGMFSRLVIDYYGSATPITQLASINVPEARLVVIKPYDAIQLHAIETAIRNSDLGVNPSNDGTLIRVAVPQLTEERRRELVKQAKCKGEDAKVSVRNIRRKVMEELHRIRKDGEAGEDEVSRAEKDLDKTTHQYVIQIDELVK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_ERYLH (Ribosome-recycling factor OS=Erythrobacter litoralis (strain HTCC2594) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 65/166 (39.16%), Postives = 116/166 (69.88%), Query Frame = -3 Query: 182 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 679 D++ RM ++ ++++ + +RTGR+N ++LD + VE YG+ + L +A +N P+ L +Q +DK+++ ++EK I ++LG+ P DG+ +RL +P LT ERRKEL+K+ + AE+ K+A+RN+RRD ++ + +K K +SED+ K + ++QKLTD+Y+ + DS Sbjct: 8 DIERRMAGAVESLKSDLSGLRTGRANTSLLDPVVVEVYGAMMPLNQVATVNAPEPRMLAVQVWDKANVSAVEKGITKANLGLNPMTDGQTVRLPMPDLTEERRKELAKLAGQYAEKAKIAIRNVRRDGMEDLKADEKAKDISEDDRKRMEDEVQKLTDKYVAEADS 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESPS (Ribosome-recycling factor OS=Desulfotalea psychrophila GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 72/167 (43.11%), Postives = 115/167 (68.86%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 ++ RM ++++ + + + VRTGR++ ++LD I V YGS + L +A + P+S + +QP+D + IEKAI+ S LG+ P NDG+V+RL +PQLT +RRK+L K V K AEE +VA+RN+RRDA+ + +K+K++SED++ L D QK TD Y+K++D + Sbjct: 7 EMSGRMAKSVEAFKNDLSRVRTGRASISILDDITVVAYGSTMPLNQVATLTIPESRMIALQPWDPQMIPPIEKAILKSGLGLNPVNDGKVVRLNIPQLTEDRRKDLVKQVKKIAEEFRVAIRNVRRDAIDTLKLQKKDKEISEDDLFKLQDDAQKETDIYIKQLDEV 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RUTMC (Ribosome-recycling factor OS=Ruthia magnifica subsp. Calyptogena magnifica GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35 Identity = 68/166 (40.96%), Postives = 116/166 (69.88%), Query Frame = -3 Query: 182 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 679 D ++RM +++ ++ F+ +R R++ ++L++I V+YYGS V L +A I+ DS + + P++K + IEKAI++S+LG+ P G+++R+ LP LT ERR EL K+V +AE+ KVA+RNIRRDA +++L KEK++S D + + +QK+TD Y+K+I++ Sbjct: 8 DAQSRMNKSVASLKNAFSKIRANRAHSSLLEQIHVDYYGSMVPLSQVANISVEDSRTFKVSPWEKDMVAVIEKAIMTSNLGLNPQTMGQIMRIPLPPLTQERRGELVKIVKDEAEQAKVAIRNIRRDANSDFKELLKEKEISRDGARKAENSIQKITDTYIKEIEA 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RICCN (Ribosome-recycling factor OS=Rickettsia conorii GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35 Identity = 70/170 (41.18%), Postives = 116/170 (68.24%), Query Frame = -3 Query: 170 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 679 +++ +ME+ + ++ +RTGR++ +LD + VE YGS + L +A ++TPD+ ++ +Q +DKS + S+EK I ++LG+TP DG++IRL +P LT ERR L K+ K E+ K+++RNIRRD +A +KL+K+ +++D LS +QKLTD+Y K+DS+ KQ Sbjct: 9 NLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTINVQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTALVKLAHKYGEDTKISLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQ 178
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_GEOBB (Ribosome-recycling factor OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35 Identity = 69/166 (41.57%), Postives = 115/166 (69.28%), Query Frame = -3 Query: 179 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 676 + M+++I+ +R + VRTGR++ ++LD I+V+ YG+ L +A + P++ ++ I P+D + IEKAI++S+LG+ P NDG++IRLTLP LT ERRK++ K + + AE+ KVA+RNIRRDA+ +KL+K+K +SED K ++Q T+ ++ K+D + Sbjct: 9 MNVHMDKSIESLRKEYQKVRTGRASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIRRDAIDQLKKLEKDKSISEDEQKRAEKEVQDFTNSHVAKVDEV 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_AZOSB (Ribosome-recycling factor OS=Azoarcus sp. (strain BH72) GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35 Identity = 72/166 (43.37%), Postives = 114/166 (68.67%), Query Frame = -3 Query: 170 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 667 +M+++ID ++T+ +RTGR++ +LD + VEYYGS V + +A I D+ ++ +Q ++K L +EKAI DLG+ P N GE+IR+ +P LT ERR++L+KVV ++ E KVAVRN+RRDA + + K+K +SED+ + D+QKLTD+Y+ +ID + Q Sbjct: 12 KMQKSIDALKTDLAKIRTGRAHTGLLDHVMVEYYGSMVPINQVANITLIDARTIGVQTWEKPMLGKVEKAIRDCDLGLNPANMGEIIRVPMPALTEERRRDLTKVVRQEGETAKVAVRNLRRDANQHLKDAVKDKTISEDDERRSQDDIQKLTDKYVAEIDKLLAQ 177
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RICFE (Ribosome-recycling factor OS=Rickettsia felis GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 70/170 (41.18%), Postives = 116/170 (68.24%), Query Frame = -3 Query: 170 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 679 +++ +M++ + ++ +RTGR++ +LD + VE YGS + L +A ++TPD+ ++ +Q +DKS + S+EK I ++LG+TP DG++IRL +P LT ERRKEL K+ K E+ K+++RNIRRD + +KL+K+ +++D LS +QKLTD+Y K+DS KQ Sbjct: 9 NLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTINVQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDTKISLRNIRRDGNEELKKLEKDNIIAKDEHHSLSEQVQKLTDDYSSKVDSAIKQ 178 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |