CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_METRJ (Ribosome-recycling factor OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=frr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 69/167 (41.32%), Postives = 113/167 (67.66%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D+K RM+ + + + S+RTGR+ P++LD I+V+ YGS + + +A ++ P+ L I +D+S + ++EKAI SDLG+ P +G+ IRL +P++ +RRKE+ KV K EE +VAVR++RRD L +KL K+ +SED+ K ++D+QK TD+Y+ +ID + Sbjct: 10 DIKRRMQGAVASLSKDLGSLRTGRATPSLLDPIQVDAYGSMMPMAQVATVSVPEPRLLSISVWDRSMVTAVEKAIRESDLGLNPQTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEEARVAVRHVRRDGLDHLKKLLKDSAISEDDEKRQATDVQKATDQYIAEIDGV 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_FRAAA (Ribosome-recycling factor OS=Frankia alni (strain ACN14a) GN=frr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 65/169 (38.46%), Postives = 111/169 (65.68%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D + +ME+ + + + +F ++RTGR PA+ KI V+YYG+P ++ +A + P+ ++I PYDKSSL SIEKA+ SDLG+ P+NDG +IR+ P+L+ +RR++L KV +AEE +V++RN+RR A +++ ++ ED + DL + T Y+ ++D + + Sbjct: 8 DAEEKMEKAVSVAKEDFANIRTGRITPAVFSKIVVDYYGAPTPVQQLASFHIPEPRMVIITPYDKSSLASIEKAVRDSDLGVNPSNDGTIIRIVFPELSEQRRRDLVKVARSKAEEARVSIRNVRRHAKDGIDRIVRDGDAGEDEGRRAEKDLDEATHRYVGQVDELLR 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESAH (Ribosome-recycling factor OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=frr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 67/168 (39.88%), Postives = 116/168 (69.05%), Query Frame = -3 Query: 176 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 679 + + RM +++ + VRTGR++ MLD ++V+YYG+ L +A I P+S + +QP+D S++K +EK I+ +++G+TP++DG++IR+T+P LT +RR+E++K V EE KVAVRNIRRD+ + LQK+ +SED ++Q +TDE++K+I++++ Sbjct: 8 ETRDRMVKSVKTLEKEMTRVRTGRASMTMLDGVKVDYYGTLTPLNQMASIAIPESRMITVQPWDISAIKEVEKGILKANIGLTPSSDGKIIRITIPPLTEDRRREIAKTVHNTCEEFKVAVRNIRRDSNDTLKSLQKDGDISEDENFKAQKEVQDITDEFIKQIEAVF 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_BORHD (Ribosome-recycling factor OS=Borrelia hermsii (strain DAH) GN=frr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 71/164 (43.29%), Postives = 115/164 (70.12%), Query Frame = -3 Query: 176 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 667 +M+R + + + + S+RTGR + A+ DK+ V+YYG L +A I+ P++ ++IQP+DKS L IE+AI+SSDL M P++DG V+R+ +P LT ERRKE+ K K AEE KVA RN+R++ +K +K+ +++ED+++ + D+Q+ T+ Y+KKID I+ Sbjct: 11 KMDRVLLSLDSEYKSLRTGRISSALFDKVLVDYYGEKTPLTRVANISIPEARLIVIQPWDKSLLSKIEQAILSSDLSMNPSSDGSVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAARNVRQELNNKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIF 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_VEREI (Ribosome-recycling factor OS=Verminephrobacter eiseniae (strain EF01-2) GN=frr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 69/163 (42.33%), Postives = 113/163 (69.33%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 RM+++I R N +RTGR+NPA+LD ++V+YYG+ V L +A + D+ ++ +QP++K IEKAI SDLG+ P G++IR+ +P ++ ERRKE++K+ + E K+AVRN+RRDA ++ +KL K+K SED K +++QK TD+++ +ID++ Sbjct: 13 RMDQSIAAFRNNLQKIRTGRANPALLDAVQVDYYGALVPLSQVANVALIDARTISVQPWEKGMGAKIEKAIRDSDLGLNPAAMGDLIRVPMPPMSQERRKEMTKLARNEGESAKIAVRNLRRDANESIKKLVKDKLASEDEQKRAETEVQKFTDKHIAEIDAL 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SACEN (Ribosome-recycling factor OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=frr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 68/165 (41.21%), Postives = 111/165 (67.27%), Query Frame = -3 Query: 173 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 667 +M++ +++ + +VRTGR+NPAM I V+YYGSP L +A I+ P++ ++I+PYD S L ++EKAI SDLG+ P+NDG++IR+++PQ+T ERRKE+ K+ + EEG++ VR IRR + +++ K+ + ED +L+ LT Y+ +ID + K Sbjct: 12 KMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASISVPEARLVVIKPYDASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHKGEEGRITVRGIRRKVKEEIDRIVKDGEAGEDEGTRGEKELENLTHRYVAQIDELVK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RENSM (Ribosome-recycling factor OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=frr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 65/170 (38.24%), Postives = 116/170 (68.24%), Query Frame = -3 Query: 170 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 679 + + +M++ +++ + +F++VRTGR+NP + K+ V+YYG+P L+ +A P++ +LLI P+D+S+L IEKA+ +S++G P+NDG VIR+ +P+LT ERR+E K+V ++E+ K+++RNIRR A ++ +K+ K+ ED +L LT + + ID + K+ Sbjct: 8 EAEEKMDKAVEVAKEDFSAVRTGRANPGLFAKVMVDYYGAPTPLQQLASFAVPEARTLLITPFDRSALGDIEKALSNSEVGANPSNDGNVIRVVMPELTQERRREYVKIVRGKSEDAKISIRNIRRKAKESLDKIVKDGDAGEDEGSRAEKELDGLTKTHTENIDELLKR 177
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_NITSB (Ribosome-recycling factor OS=Nitratiruptor sp. (strain SB155-2) GN=frr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 67/165 (40.61%), Postives = 117/165 (70.91%), Query Frame = -3 Query: 170 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 664 M++++D+++ +FN++RTGR A+++ I+V+YYG+P L A + D+++++I P+DKS L IE+AI +++G+ PNNDG+ I+L P +T E+R+ +K + E+ K+A+RN+RRDA +KL K+K ++ED K ++QK+TDE++KK+D + KQ Sbjct: 14 MQKSLDVLKKDFNTLRTGRVTTAVVENIKVDYYGAPTPLNQAASVVAADATTIVISPWDKSLLGEIERAIQEANIGVNPNNDGDQIKLFFPPMTVEQREAEAKKAKQFGEKAKIAIRNVRRDANDKIKKLFKDKAITEDEEKRGLEEVQKITDEFIKKVDDLVKQ 178
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_RHOP5 (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain BisA53) GN=frr PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 70/167 (41.92%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 ++K RM+ ++ +RTGR++ +ML+ ++V+ YG+ + L +A I+ P+ L +Q +DKS +K++EKAIV S+LG++P+ +G+VIRL +P+L ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ + L+ D+QK+TD ++++D + Sbjct: 10 ELKRRMQGATHALQHELGGLRTGRASSSMLEPVQVDAYGTHMPLIQVATISVPEPRLLSVQVWDKSMIKAVEKAIVDSNLGLSPSTEGQVIRLRIPELNEERRKELVKVAHKYAEAARVAVRHVRRDGLDTLKKLEKNHEISEDDQERLAHDVQKVTDATIQEVDQL 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CHLSY (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=frr PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 72/167 (43.11%), Postives = 114/167 (68.26%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + +A +++ + +R + S+RTGR++ A+++ + VE YG + L +A I+ P+ ++IQPYD + +K+IEKAI SDLG+ P+NDG VIRL +P LT ERR+EL K+V + EE K++VRN RRDA+ +KL+ EK +SED + +Q+LTD +++D I Sbjct: 8 EYEAHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDLKKLEAEKLISEDELHRGQERIQQLTDRCTRELDQI 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |