CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESRM (Ribosome-recycling factor OS=Desulfotomaculum reducens (strain MI-1) GN=frr PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43 Identity = 85/164 (51.83%), Postives = 122/164 (74.39%), Query Frame = -3 Query: 173 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 664 M++++D+VR F S+R GR+ P++LDK+ V YYG+P L +A I+ P++ L+IQP+DKS + +EKAI+ SD+G+TP++DG VIRL +PQLT ERR EL KV+ K+AEEG+VAVRNIRRD + + QK+ + ED K +LQKLTD+Y+K+ID + K Sbjct: 13 MKKSVDVVRREFASLRAGRATPSILDKVTVSYYGTPTPLNQLANISVPEARVLVIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGRVAVRNIRRDTNDSIKAKQKD-GIPEDEAKRGQDELQKLTDKYVKEIDEMVK 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_BDEBA (Ribosome-recycling factor OS=Bdellovibrio bacteriovorus GN=frr PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43 Identity = 85/170 (50.00%), Postives = 122/170 (71.76%), Query Frame = -3 Query: 170 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 679 + +A+ME+T++ + VRTGR+ +MLD I V YYG+P L +A I+TPD+ S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AEE +VAVR RRDA +KLQK+K +SED K +D+QK+TD+++KK+D + ++ Sbjct: 9 NAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARVAVRMARRDANDEVKKLQKDKAVSEDEGKKAEADIQKVTDDFIKKVDQVAEE 178
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_ANATD (Ribosome-recycling factor OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=frr PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43 Identity = 79/163 (48.47%), Postives = 120/163 (73.62%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M++ I+ ++ F ++R GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++ LK IEKAI SDLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KVA+RNIRR+AL Y+K++K +++ED++KD D+QKL D+Y+++I+ + Sbjct: 11 KMKKAIETLKEEFATIRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMIVIQPWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREALDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKL 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.484e-42 Identity = 81/168 (48.21%), Postives = 122/168 (72.62%), Query Frame = -3 Query: 170 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 673 K +M++ + +VR GR+N +L+K+ V+YYG + +A I+ P++ L+IQPYDKS +K +EKAI++SDLG+TP+NDG VIRL +P LT ERR+EL+K+V K +EE KVAVRNIRRDA +KL+K +++ED ++ + ++QKLTD ++ KID+I K+ Sbjct: 10 KEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKE 177
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLOPH (Ribosome-recycling factor OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=frr PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.484e-42 Identity = 75/165 (45.45%), Postives = 125/165 (75.76%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 + +M++++D ++ + +R GR+NP +LDK+ V+YYG+P +++++A ++ P++ + IQP++ +K IEKAI++SDLG+TP+NDG+VIRL P+LT ERRK+L K V K+AE KVAVRN+RRDA A +KL K ++SED K + ++QK+TD+++ ++D + Sbjct: 9 EGKMQKSLDSLKEEYVGIRAGRANPHLLDKLRVDYYGTPSAIQAVANVSVPEARVIQIQPWEAKLIKEIEKAIIASDLGLTPSNDGKVIRLVFPELTEERRKDLVKDVKKKAENTKVAVRNVRRDANDAIKKLAKANEISEDEQKQIEDEIQKITDKFITEVDKV 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_BACP2 (Ribosome-recycling factor OS=Bacillus pumilus (strain SAFR-032) GN=frr PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.484e-42 Identity = 83/167 (49.70%), Postives = 117/167 (70.06%), Query Frame = -3 Query: 173 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 673 K +ME+ + +VR GR+N ++LDK+ V+YYG+ L IA I P++ L+I PYDK+++ IEK+I SDLG+TP +DG VIR+ +P LT ERRKEL KVV K +EE KVAVRN+RRDA +KL+K +++ED ++ + D+QKLTDEY+ KID + K Sbjct: 10 KEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVMK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_EUBR3 (Ribosome-recycling factor OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=frr PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.938e-42 Identity = 78/162 (48.15%), Postives = 120/162 (74.07%), Query Frame = -3 Query: 182 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 667 +ME+T++ + + +R GR+NP +LDK+ V+YYG+P ++S+A ++ P+ + IQP++ S +K IEKAI SD+G+ P NDG++IRL P+LT ERRK+L+K + K+ EE KVAVRNIRRDA+ + +K KE+ +SED +K L D QKLTD+++ K+D+ Sbjct: 11 KMEKTLNNLEEEYAGIRAGRANPHILDKLRVDYYGTPSPIQSVANVSVPEPRMIQIQPWEASMVKEIEKAINCSDIGINPTNDGKLIRLVFPELTEERRKDLAKDIKKKGEEAKVAVRNIRRDAIDSIKKTGKEEGISEDEIKGLEDDAQKLTDKFVAKVDA 172
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESHY (Ribosome-recycling factor OS=Desulfitobacterium hafniense (strain Y51) GN=frr PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.938e-42 Identity = 83/167 (49.70%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + + RM + ++ ++ + ++R GR+NP MLDKI VEYYG+ + +A I+ P+ L IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AE+ +VAVRNIRRD+ +KL+K+ SED VK D+QK+TD+++K+I+ I Sbjct: 8 EAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRVAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDDVQKMTDKFVKEIERI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLOD6 (Ribosome-recycling factor OS=Clostridium difficile (strain 630) GN=frr PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.531e-42 Identity = 81/166 (48.80%), Postives = 122/166 (73.49%), Query Frame = -3 Query: 179 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 676 ++ +M TID ++ F ++R GR+N MLDKI V+YYG+P + I I+ P+ L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K AEE KV +RN RRDA + +K++K +L+ED +K ++QK+TD+++K+ID++ Sbjct: 9 LEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESVV (Ribosome-recycling factor OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=frr PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.306e-42 Identity = 79/165 (47.88%), Postives = 119/165 (72.12%), Query Frame = -3 Query: 185 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 679 D + RME+ I + F+ +RTGR++ +++D I+V+YYG+P + +A + PDS + IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 9 DAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |