CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_DESVH (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=frr PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.306e-42 Identity = 79/165 (47.88%), Postives = 119/165 (72.12%), Query Frame = -3 Query: 185 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 679 D + RME+ I + F+ +RTGR++ +++D I+V+YYG+P + +A + PDS + IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 9 DAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_THETN (Ribosome-recycling factor OS=Thermoanaerobacter tengcongensis GN=frr PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.318e-42 Identity = 81/167 (48.50%), Postives = 123/167 (73.65%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D + RM++T++++++ ++R GR+NPA+LD+I V YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL LP+LT ERRKEL K+V K+AEE ++AVR IRRDA +K++K+ ++SED K ++QKLTD+Y+K+ID + Sbjct: 7 DSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVLVVQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEARIAVRQIRRDANDLVKKMEKDGEISEDERKRREEEIQKLTDKYIKEIDKM 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LAWIP (Ribosome-recycling factor OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=frr PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.318e-42 Identity = 78/166 (46.99%), Postives = 122/166 (73.49%), Query Frame = -3 Query: 182 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 679 D + RM + I + F +RTGR++ +++D I+V+YYG+P + +A I PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+ K E+ K+A+RNIRRDA + ++L+K K +SED +K + D+QK+TD Y+K++++ Sbjct: 11 DSQERMVKAITSLEKEFTKLRTGRASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIRNIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVET 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACDB (Ribosome-recycling factor OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=frr PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.318e-42 Identity = 83/165 (50.30%), Postives = 121/165 (73.33%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I PYDKSSL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+AVRN+R++A+KA +K +K+ +++ED + L ++QK+TDE KKID + Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITPYDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLOAB (Ribosome-recycling factor OS=Clostridium acetobutylicum GN=frr PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.639e-42 Identity = 80/167 (47.90%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 +++ +M ++I ++ S++ GR+NPAMLD+IEV+YYG+ L +A I+ P+S L+IQP+DKS++KSIEKAI+ SDLG+ P+NDG +RL +P+LT E RK + K V K E+GKVA+R IRRDA + L+K+ ++ED +K +D+QK TD Y+K+ID + Sbjct: 8 ELEEKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPESRVLMIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGEDGKVALRAIRRDANDKVKSLKKDNSITEDEMKSAENDIQKKTDSYVKEIDKM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CALS8 (Ribosome-recycling factor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=frr PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.639e-42 Identity = 78/163 (47.85%), Postives = 120/163 (73.62%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M++ I+ ++ F +VR GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++ LK IEKAI +DLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KVA+RNIRR+A+ Y+K++K +++ED++KD D+QKL D+Y+++I+ + Sbjct: 11 KMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQLASITVPEARMIVIQPWEARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREAIDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKL 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CARHZ (Ribosome-recycling factor OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=frr PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.365e-42 Identity = 81/169 (47.93%), Postives = 123/169 (72.78%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 + + M++ I++++ F ++R GR+ PA+L+K+ VEYYG+ + + +A I+ P+ L+IQP+DK +L +IEKAI+ SDLG+TP NDG VIRL +P LT ERR+EL KV K+AEE +VA+RNIRRDA + L+K+K +SED K ++QKLTD+++K +D + K Sbjct: 8 EAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEPRLLVIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAEEARVAIRNIRRDANDRIKDLEKDKVISEDEGKRGQDEVQKLTDKFIKTVDELLK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_THEPX (Ribosome-recycling factor OS=Thermoanaerobacter sp. (strain X514) GN=frr PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.619e-42 Identity = 80/163 (49.08%), Postives = 119/163 (73.01%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M++++ +++ ++R GR+NPA+LD+I V+YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KVAVR IRRDA A +K++K ++SED K ++QKLTD+Y+K+ID + Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKV 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_THEP3 (Ribosome-recycling factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=frr PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.619e-42 Identity = 80/163 (49.08%), Postives = 119/163 (73.01%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M++++ +++ ++R GR+NPA+LD+I V+YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KVAVR IRRDA A +K++K ++SED K ++QKLTD+Y+K+ID + Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKV 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACDA (Ribosome-recycling factor OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=frr PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.619e-42 Identity = 82/165 (49.70%), Postives = 121/165 (73.33%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I PYDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+AVRN+R++A+KA +K +K+ +++ED + L ++QK+TDE KKID + Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQM 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |