CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRU0 (Ribosome-recycling factor OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=frr PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.256e-41 Identity = 82/163 (50.31%), Postives = 115/163 (70.55%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 R E++ + + S+R GR+N ++LD+I+VEYYG P L +A I P++ LLI P+DKSS+K IE+AI +SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +K K+++ED +K L D+QK TD+ +K ID + Sbjct: 12 RFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENQKIAIRNIRRDAMDEAKKQEKNKEITEDELKALEKDIQKATDQAIKHIDGM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_BREBN (Ribosome-recycling factor OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=frr PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.256e-41 Identity = 79/169 (46.75%), Postives = 121/169 (71.60%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D++ RM + I+ ++ + +S+R GR+NPAMLD++ V+YYG+P + +A I+ P+ L IQP+DK++LK I++A+ SDLG++P+NDG +IRL +P LT ERRKEL K+ K EE KVA+RNIRRDA +KL+K +SED+ + +QK TD+++ ++D I K Sbjct: 8 DMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPRMLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEEAKVAIRNIRRDANDEIKKLEKAATISEDDSRRHQETIQKTTDKFIAEVDKIVK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRTD (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=frr PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRT2 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=frr PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRT1 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain CNRZ 1066) GN=frr PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K R T + + F ++R GR+N ++LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 10 KERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SYNAS (Ribosome-recycling factor OS=Syntrophus aciditrophicus (strain SB) GN=frr PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.143e-41 Identity = 80/170 (47.06%), Postives = 119/170 (70.00%), Query Frame = -3 Query: 170 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 679 ++K ME+ + + +FN VRTGR++ ++LD I+ +YYG+P L +A ++ P+S +LI P+D S+L +IEKAI SDLG+ PNNDG+VIR+++P LT RRKEL KVV K AEE KV +RN RRDA + ++ ++K +SED + D +QK+TD Y++K + I Q Sbjct: 8 ELKQNMEKGLQALEKSFNKVRTGRASISLLDGIKADYYGTPTPLNQVATLSVPESRQILISPWDTSALNAIEKAIQKSDLGLVPNNDGKVIRISIPPLTEARRKELVKVVRKMAEECKVKLRNARRDANEEFKSMKKNNDISEDQMHDYQDQVQKMTDSYIEKSEDILVQ 177
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_GEOSL (Ribosome-recycling factor OS=Geobacter sulfurreducens GN=frr PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.143e-41 Identity = 74/167 (44.31%), Postives = 124/167 (74.25%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D+K+ ME++++ +R + VRTGR+N +LD+I V++YG+P L +A + P+ ++ IQP++ + IEKAI++++LG TP+NDG++IR++LP LT ERRKE+ K + K AE+ K+A+RNIRRDA+ +KL+K+KK+SED++K ++Q +T+ Y+ K+D + Sbjct: 8 DMKSHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTITIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAKIAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQDVTNVYVAKVDEV 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRPM (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M28 GN=frr PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.799e-41 Identity = 80/163 (49.08%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 185 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 673 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K+ID Sbjct: 10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKVTDDAIKEID 172
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LEPIN (Ribosome-recycling factor OS=Leptospira interrogans GN=frr PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.655e-41 Identity = 77/166 (46.39%), Postives = 121/166 (72.89%), Query Frame = -3 Query: 179 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 676 +K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + +QK+TD Y+ KI ++ Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSVQDQIQKITDSYIDKISAL 173
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LEPIC (Ribosome-recycling factor OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=frr PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.655e-41 Identity = 77/166 (46.39%), Postives = 121/166 (72.89%), Query Frame = -3 Query: 179 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 676 +K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KVA+RNIRRDA++ +K + +S+D +K + +QK+TD Y+ KI ++ Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAIRNIRRDAMEDLKK--HTEGMSQDEIKSVQDQIQKITDSYIDKISAL 173 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |