CV712547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.126e-68 Identity = 134/265 (50.57%), Postives = 183/265 (69.06%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVL 790 S QKEY EL N++KE+ E QG RSDA+ Q L S N++K E++Y SD+K R KK++ K E +L+FFLKRYL QLRW S ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ K L EL K G+ IIEP RLS+K DGQF +YQ +GI+L+HK+K + + +EK YVD+ FD IA+H KM N ++NHYDLL+ E IL P+RRR LR L+CFNS N+N + NP+FF NN + G+ L Sbjct: 1537 SSNQKEYLELENRNKEK-EQPGQGDIRSDARNQENLESDAQNKKKYVEKDYAESDIKKRRKKRKYKSNKEAELEFFLKRYLLFQLRWDD--SLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLTLTELIKRGIFIIEPARLSIKRDGQFIMYQTIGISLIHKSKHQTNRECREKKYVDENSFDGSIAQHGKMLVNGDENHYDLLISENILSPRRRRNLRILMCFNSSNENIVDINPIFFNENNVRNSGQFL 1798
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_POPAL (Putative membrane protein ycf1 OS=Populus alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.048e-67 Identity = 132/257 (51.36%), Postives = 176/257 (68.48%), Query Frame = 2 Query: 20 YFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 + +S+ + +L +Q +++ QV L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S EKI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F E I +Q +T N++KN+YDLLVPE +L K RRELR LI FNSKN N + + NN K ++ Sbjct: 1507 FISISSNETKSIQLKNQNHEEKESEDQVDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNEKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFTESIVINQSLTRNKDKNNYDLLVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHII 1761
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_POPTR (Putative membrane protein ycf1 OS=Populus trichocarpa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.734e-66 Identity = 130/257 (50.58%), Postives = 176/257 (68.48%), Query Frame = 2 Query: 20 YFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 + +S+ + +L +Q +++ QV L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S +KI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F+E I +Q +T N++KN+YDL VPE +L K RRELR LI FNSKN N + + NN K ++ Sbjct: 1509 FISISSNETKSIQLKNQNHEEKESEDQVDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNQKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHII 1763
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.734e-66 Identity = 134/252 (53.17%), Postives = 171/252 (67.86%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +K+ N +KEE E A Q SD +K+ S L NQEK+ EENY S +K R KKQ K +E +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK ++ I K+QK T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N Sbjct: 1478 EKKSLRFYNLTKEEKESAGQVELESDKEKKRNPESALLNQEKNIEENYAESTIKKRKNKKQYKSNSEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPIRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYIDKKKIEKSITKYQKKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKTVRDRNSRFDKN 1727
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_LIRTU (Putative membrane protein ycf1 OS=Liriodendron tulipifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.577e-65 Identity = 130/254 (51.18%), Postives = 177/254 (69.69%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 763 S QKEY EL N+++EE E QG LGS N++KD E++Y SD+K R KK+QSK E +L+FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQ+ +YQ +GI+LVHKNK + + +EK YVD+ FD IA+H K+ N ++N+Y LLVPE I P+RRRELR LIC NS+N N + +N VFFN Sbjct: 1524 SSNQKEYLELENRNQEEKEQLGQGN----------LGSDPRNRQKDLEKDYAESDIKKRRKKRQSKSNKEAELNFFLKRYLLFQLRWDDPLN--QRMINNIKVYCLLLRLINPKEIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQWIMYQTIGISLVHKNKYQTNRICREKKYVDENSFDRSIAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENGNVVDRNSVFFN 1765
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CRUWA (Putative membrane protein ycf1 OS=Crucihimalaya wallichii GN=ycf1-A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.242e-64 Identity = 133/254 (52.36%), Postives = 170/254 (66.93%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKR--KITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +K+ N +K+E E Q SD ++Q S LSNQEK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KIL++++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK D+ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N Sbjct: 1477 EKKSRRFYNLNKDEKESTGQVEFESDKEQQRNSESALSNQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILDNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKNKDKISKRYKKKSYIDKKKIDKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNFKKKTARDRNSRFDKN 1728
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_ARATH (Putative membrane protein ycf1 OS=Arabidopsis thaliana GN=ycf1-A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.242e-64 Identity = 130/252 (51.59%), Postives = 169/252 (67.06%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +KE N +KEE E A Q SD + + + NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++A++SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y++KK F++ I K+Q T N+ KN+YD VPE IL PKRRRE R LICFN K +N N F N Sbjct: 1468 EKESLRFYNLNKEEKESAGQVELESDKETKRNPEAARLNQEKNIEENFAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAVSSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEKILSPKRRREFRILICFNLKKKNARDTNSRFDKN 1717
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CAPBU (Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.623e-64 Identity = 132/252 (52.38%), Postives = 167/252 (66.27%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +K+ N +KEE E A Q SD +K+ S L NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI LVHKNK KI+KR ++K Y+DKK F++ K+Q T NR K HYD VPE IL PKRRRE R LICFN K + +N F N Sbjct: 1473 EKKSLRFYNLNKEEKESAGQFELESDKEKKRNPESALLNQEKNIEENFAESMIKKRQNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGIPLVHKNKHKISKRSKKKSYIDKKIFEKSKTKYQNKTVNRKKKHYDFFVPENILSPKRRREFRILICFNLKKKTARDRNSRFDKN 1722
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_BARVE (Putative membrane protein ycf1 OS=Barbarea verna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.768e-64 Identity = 130/252 (51.59%), Postives = 168/252 (66.67%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +K+ N +KEE E A Q SD + + S L QEK+ EENY S +K R KKQ K TE +LD FL R+ QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI++RY++K Y DK+ ++ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K +N +N F N Sbjct: 1475 EKKSLRFYNLNKEEKESASQVELESDKENKKNPESALLKQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRHSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISQRYKKKSYSDKQKIEKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFDKN 1724
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.615e-64 Identity = 131/248 (52.82%), Postives = 173/248 (69.76%), Query Frame = 2 Query: 26 ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 763 ++ N+ +EE E A QG SD + + LG VLS + +++YT SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF N Sbjct: 1577 KIKNRIQEEKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYTESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCN 1822 The following BLAST results are available for this feature:
BLAST of CV712547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712547 ID=CV712547; Name=CV712547; organism=Citrus sinensis; type=EST; length=791bpback to top |