CV712547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CUCSA (Putative membrane protein ycf1 OS=Cucumis sativus GN=ycf1-A PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.436e-44 Identity = 104/257 (40.47%), Postives = 152/257 (59.14%), Query Frame = 2 Query: 8 TQKEYFELSNQSKEENE-LADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKK-FALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 ++K+ E N +K + E +A +G + SVLSN K+ +++ G+D+K IKKKQSK++ E +L + QL W + +N + + ++R ++ +++A+I+ E SL L+ EL + G+ IIEP RLS+KNDG+F + Q +GI+LV KNK ++ +RYQEKGY K+ F E IA HQK T NR NHYDLLVPE IL P+ RRE R LICFNS N+N + +N F + K Sbjct: 1567 SKKKLIEKKNGNKAKKESVAKEG-----------VDSVLSNHTKNLQKDSAGADVKKGIKKKQSKKKIEGKLGVLRTGHFRFQLNWPNPEISKSLFMN-LNGFSFMLRRLDLKKLSLAAIRNNEFSLEFLLPPSDDITFHELLEKGIFIIEPVRLSLKNDGKFIMSQTIGISLVQKNKYQLNQRYQEKGYPYKRSFAESIAIHQKRTENRTSNHYDLLVPENILSPRGRREFRILICFNSGNKNDIHRNTAFDDGNK 1811
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_LOTJA (Putative membrane protein ycf1 OS=Lotus japonicus GN=ycf1 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.579e-43 Identity = 110/262 (41.98%), Postives = 159/262 (60.69%), Query Frame = 2 Query: 26 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIK---KKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILI--TKKKFAL------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 E N++K+E T R D K LSNQEKD EE+Y SD K K KK+ K + E +++ L++YL L W+G S ++++N+++VYC L+RL N +AI+SIQRGE+SL I++ +K L KE + G+ IIEP RLS KN+ QFF+Y+ + L+HK+KR+I +R EK +DK+ F + I + Q++T N+ K HY L+V E IL +RRRELR LICFN ++ N M + +F N K Sbjct: 1478 ETPNRAKKEY------TSRVDLNKPS-----LSNQEKDIEEDYGESDSKKGGKDKNKKKYKNKIEAEVNLLLRKYLNFHLNWKG--SLNKRVINNVKVYCLLIRLKNIKQIAISSIQRGELSLDIMMIQNEKDSTLTGFRKKKEFIEKGIFIIEPVRLSRKNNEQFFMYETARLLLIHKSKRQINQRNPEKSDLDKQIFYKNIPPKRDQRITQNKEKKHYALVVIENILSARRRRELRILICFNPRSINSMPRKTIFDNENK 1726
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_HELAN (Putative membrane protein ycf1 OS=Helianthus annuus GN=ycf1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.478e-41 Identity = 95/204 (46.57%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 164 DMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVS-FREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 ++K + ++S E+ +L +K LQLRW G ++ +K++N++Q+Y LV LIN ++I+ IQR EM+L I+ +++ L +LTK G+LI+EP RLSVKNDGQFF+YQI+GI+LVHK+K + +RY+ V K FDE I +H+ T NR+K + DLLVPE IL +RRRELR LI FN KNQN + + F K Sbjct: 1444 ELKNQNNIEESLLESIEKLQILIKGDFPLQLRWTGRLNQLNQKMMNNIQIYGLLVSLINVRKISISYIQRKEMNLDIM--RRRLNLTQLTKKGILIMEPARLSVKNDGQFFMYQIIGISLVHKSKHQSNQRYRNPQNVAKNHFDESIPRHK--TLNRDKKNSDLLVPEKILSSRRRRELRILISFNLKNQNNVHRKKFFCKENK 1643
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_EPIVI (Putative membrane protein ycf1 OS=Epifagus virginiana GN=ycf1 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.059e-39 Identity = 104/247 (42.11%), Postives = 150/247 (60.73%), Query Frame = 2 Query: 35 NQSKEENELADQGTPRSDAQKQVILGSVLS-NQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 N SK NE T R D LGSVL +Q+KD EE+Y S+ + R KKQ K +TE +LDFFLKR QLR+ ++ ++++N++++YC L+RLI+P + I+SI + E++L I+ +K L EL K G+LIIE R S K GQF +YQ +GI+L++KNK++ K+YQ++ Y K K ++LL PE IL +RR++LR LIC NSKN N + NP+F+N K Sbjct: 1454 NSSKTINEKKGP-TGRED------LGSVLILSQKKDIEESYERSEKEKR--KKQYKNKTEAELDFFLKRCFLFQLRFSDTLN--KRMINNIKIYCLLLRLIDPRKIIISSIHKREINLDIIPIRKNLILTELIKNGVLIIETIRFSRKY-GQFSMYQTIGISLINKNKQQTNKKYQDQIYFSK------------------KKKFNLLFPENILSFRRRKKLRILICLNSKNVNDIDINPIFWNEKK 1670
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.605e-35 Identity = 95/264 (35.98%), Postives = 148/264 (56.06%), Query Frame = 2 Query: 32 SNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYT----GSDMKTR-IKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFAL----------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 S SK ++++ R +K+ I S +++D E+N GS+ + IKKK+ K EV+L F ++ +L W+ + + I ++++VYC L+RL N + IASIQRGE+ L I+I + + L +L K + +IEP RLS KN+ QF + + ++L+HKNKRKI K+Y +K +V+KK F ++I + QK+T K + LVPE IL +RRRELR IC N+N + +N +F N K Sbjct: 1435 SKVSKVNKNVSEKNITR---KKKRIAVFRASKKQEDIEKNSVAVGRGSEKNSYVIKKKKVKNNMEVELHFLVRNFLIFHFNWKNFLG--QNIFHNVKVYCLLIRLTNLRKMTIASIQRGELGLDIMIIQNQKNLTLPGLSKNKNNKLRKKELFVIEPVRLSRKNNKQFLKSKTMDLSLIHKNKRKIDKKYLKKIHVNKKSFYKYITRTRDQKITEKNEKEILNFLVPENILSARRRRELRMRICLYPNNRNSIHRNTIFDNENK 1693
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_LACSA (Putative membrane protein ycf1 OS=Lactuca sativa GN=ycf1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.649e-34 Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = 2 Query: 203 ETEVQLDFFLKRYLCLQLRWRGAVS-FREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICF--NSKNQNGMQKNPVFFNNGK 772 E+ +L FLK LQLRW G V+ +KI+N++Q+Y L+ LIN + I+ IQR EM L I+ + L +L K G+LI+EP RLS+KNDGQFF+YQI+ I+LVHK+K + +RYQ K + + N +K + DLLVPE IL +RRRELR LI F N KN G+ +N + +N K Sbjct: 1489 ESTEKLKIFLKGDFPLQLRWAGRVNQLNQKIMNNIQIYGLLLSLINVRKITISYIQRKEMDLGIM--SRNLNLTQLMKTGILILEPARLSLKNDGQFFMYQIISISLVHKSKYQSNQRYQ---------------KQENVAKNIDKKNSDLLVPEKILSSRRRRELRILISFNLNLKNNTGVDRNTLVYNENK 1664
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_JASNU (Putative membrane protein ycf1 OS=Jasminum nudiflorum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.765e-32 Identity = 97/287 (33.80%), Postives = 148/287 (51.57%), Query Frame = 2 Query: 38 QSKEENELADQGTPRSDAQKQVILGSVLS---NQEKDGEENYT-GSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVS--FREKILNDMQVYCHLVRL-----------INPSDVAIASIQRGEMSLPILITKKKFALKELT--KGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKG--YVDKKDFDEFIAKHQKMTGN------------------------RNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 763 + +E+ + + T + D + + L SV S N KD +E D KK + +E + +LD FL+RY ++W V K + +VY +L RL I+P+ + ++S +RGE++ IL T+ + K+L + ++ EP RL KN+GQF +YQ +GI+LVH NK +I R+++K Y K +FDE I H+++T N +KNH DLLVPE I +RRR+LR L C NSKN+N + +NPVF N Sbjct: 1586 KKEEKQNIKKELTTKGDLENKGDLESVPSKEKNPSKDSKEKKDIQKDSAESTTKKVTSKELQKELDAFLQRYSGYLVKWNRRVDPDIVPKSEINWEVYSYLYRLFDDENPRNRKEIDPTHLVLSSAKRGELAFEILATRPIQSWKKLLLKRKELVFFEPIRLFGKNNGQFIMYQTIGISLVHNNKHEIQPRFRKKKKRYGSKTNFDESIPPHERITRNDERIPTNDEDEKRNKRLRINYERNADKNHLDLLVPENIFSFRRRRKLRILNCLNSKNRNDVDRNPVFCN 1872
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CUSRE (Putative membrane protein ycf1 OS=Cuscuta reflexa GN=ycf1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31 Identity = 87/243 (35.80%), Postives = 136/243 (55.97%), Query Frame = 2 Query: 41 SKEENELADQGTPRSDAQKQVILGSVLSNQ---EKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKK-FALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVF 757 SK+++E + +D++++ S N +KD +E+ T SD K++K+E E +L+ F K+Y QLR G +F++ ++Q+YC L+RL N + ++ IQR + +L I+ T F + E K L+++P L +K +G+F LYQIVGI+LVHK+K + + Y+++ I MT N NH D+LV E IL + RRE RTLIC N KN NG+ N +F Sbjct: 1462 SKQKSETDSKQKSETDSKQKSETDSKQKNNAEIQKDLDEDSTKSD-------KKNKKEKETELELFAKKYFLFQLR--GDPTFKKSFFKNIQIYCLLLRLTNRKKMTLSCIQRRKFNLRIMPTMTNLFNVPEFLKMTGLVMDPLPLLIKTNGKFLLYQIVGISLVHKSKHQTNQTYRKR-----------IIIRAGMT-NLENNHLDVLVLENILSSRCRREFRTLICLNYKNWNGVNTNSIF 1683
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CUSEX (Putative membrane protein ycf1 OS=Cuscuta exaltata GN=ycf1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.460e-30 Identity = 84/243 (34.57%), Postives = 135/243 (55.56%), Query Frame = 2 Query: 32 SNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFA-LKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVF 757 SN S+ +++ + +D+Q++ I + +K EE+ T SD +K+ETE++L+ F K+Y QLR G +F + ++Q+YC L+RL N + ++ IQR +++L I+ + + E K L+++P LS+K DG+F LY+IVGI+LVHK+K + K+Y++ + + NH D+LV E IL + RRELRTLICFN KN NG+ +F Sbjct: 1357 SNLSEIDSQQKSETDSETDSQQKNI-----AETQKYLEEDSTKSD---------TKKETELELELFTKKYFLFQLR--GDQTFNKSFFKNIQIYCLLLRLRNRKKMTLSCIQRRKLNLRIMPSMTNLLNVPEFLKRTGLVMDPLPLSIKTDGKFLLYKIVGISLVHKSKDQTNKKYRKTRIIRAVE----------------NNHLDVLVLENILSSRCRRELRTLICFNYKNWNGVNTTSIF 1567
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_IPOPU (Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.300e-28 Identity = 77/255 (30.20%), Postives = 135/255 (52.94%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILI-TKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 763 S T E +N S++++E + +D++K+ S ++ +++ T S+ K+ ++ T + F+K+Y LQLRW + + I ++++ IN + ++ I+R ++ L ++ +K ++ + K ++++ LSVKN+GQF +YQ +GI+LVHK+K K ++Y++ Q++ R NH+D LV E IL +RRRELR LICFNS N N + N VFFN Sbjct: 1751 SKTNSEKKSKTN-SEKKSETDSEKKSETDSEKKSETDSEKKSETDSEKKSETDSEKKSETDSEKKSLSTRELRELFMKKYFLLQLRWDQR-NIGQNIRKNVRILALPKSSINLETMTLSCIERRKLQLNVMWKSKSNLSILKFFKSIGMVVDRLGLSVKNNGQFLMYQTIGISLVHKSKNKTNQQYRK----------------QRIIRARENNHFDALVLENILSSRRRRELRILICFNSNNWNDVDTNSVFFN 1987 The following BLAST results are available for this feature:
BLAST of CV712547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712547 ID=CV712547; Name=CV712547; organism=Citrus sinensis; type=EST; length=791bpback to top |