CV712547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CUSOB (Putative membrane protein ycf1 OS=Cuscuta obtusiflora GN=ycf1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 66/256 (25.78%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 41 SKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKK---QSKRETEVQ-------------LDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPI----------LITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQ 730 +K ++ +Q T + + + + + + N+E EN ++ K + K K + +ETE Q + F+K++L QLR G F++ ++Q+ C L+RL+N +++ +SIQR +++L I L ++ + E K + EP L + +G+F +YQ++ ++LVHK K + +G + + + +A H +PE IL +RRRELR L+C N K + Sbjct: 1367 NKLSSQQQNQTTTKINTETKNQQKNRVENEENKETENQQNAETKNKQKSKTENEENKETENQQNDESEDDPQLAYIRSFMKKHLLFQLR--GESIFKKSGFKNIQILCLLLRLMNQNEMLFSSIQREKLNLHIMPEIGIKDLTLEVLEEIGVPEFLKEKRVNFEPFPLYINKNGKFLIYQLLNMSLVHKIKYPTNNESRNQGVITTQKNNN-VASH---------------IPENILSSRRRRELRILMCLNKKKK 1604
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CUSGR (Putative membrane protein ycf1 OS=Cuscuta gronovii GN=ycf1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15 Identity = 69/256 (26.95%), Postives = 121/256 (47.27%), Query Frame = 2 Query: 41 SKEENELADQ-GTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKK---QSKRETEVQ-------------LDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELT-------------KGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFN 718 SK++N+ + T + QK S + N++ EN ++ K + K K + +ETE Q + F+K++L QLR G F++ ++Q+ C L+RL+N +++ +SIQR +++L I+ + +KELT K + EP L + +G+F +YQ++ ++LVH K + +G + + K+ M + +PE IL +RRRELR L+C N Sbjct: 1368 SKQQNQTTTKMNTETKNKQK-----SKVENEKNKKTENQQNAETKNKQKSKTENEGNKETENQQNDESEDDPQLAYIRSFMKKHLLFQLR--GESIFKKSGFKNIQILCLLLRLMNQNEMLFSSIQRQKLNLHIM---PEIGIKELTLEVLEEIGVPEFLKEKRVNFEPFPLYINKNGKFLMYQLLNMSLVHNIKYPTNNESRNQGVITTQ-------KNNNMASH---------IPENILSSRRRRELRILMCLN 1597
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_OENEH (Putative membrane protein ycf1 OS=Oenothera elata subsp. hookeri GN=ycf1 PE=3 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 353 IASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKN-DGQFFLYQIVGIALV-------HKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNS---KNQNGMQKNPVFFNNGKGGGRVL 790 ++SI+R + + A LT G + IEP R+S +N D F +YQ++ I+LV H + ++T++Y+ + ++F F+ K T +K+ DL VPETIL KRRRELR LI F S K +N + KNPVF+ K G V+ Sbjct: 2263 LSSIKRERLKMEFSTRNNSLATIMLTHG-IFSIEPLRISRQNQDASFLIYQLIKISLVEQLDPYDHNDSFELTEKYRAR-----RNF--FMPKTNAET--MHKSDSDLFVPETILSTKRRRELRILISFYSRRGKRKNRIYKNPVFWKYVKNCGEVV 2409 The following BLAST results are available for this feature:
BLAST of CV712547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712547 ID=CV712547; Name=CV712547; organism=Citrus sinensis; type=EST; length=791bpback to top |