CV712546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_LEPVR (Putative membrane protein ycf1 OS=Lepidium virginicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.903e-63 Identity = 132/244 (54.10%), Postives = 165/244 (67.62%), Query Frame = -2 Query: 49 NQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 780 N + EE ELAD+ SD +KQ+ S LSNQEK +E Y S K R KKQSK TEV+LD FL R+ QLRW F +KILN+++VYC L+RL NP+++AI+SI+RGEMSL IL+ +K F L +L K G+LIIEP RLSV+N+GQ +Y+ +GI+LV KNK KI+KRY KK ++ I K+QK T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N Sbjct: 1433 NLNNEEKELADEVELESDNEKQINPESALSNQEKTIQEIYAESKKKKRQNKKQSKSNTEVELDLFLTRHSRFQLRWN--CFFNQKILNNVKVYCLLIRLKNPNEIAISSIERGEMSLDILMIEKNFTLAKLMKKGILIIEPVRLSVQNNGQLIIYRTIGISLVQKNKHKISKRY-------KKKIEKSITKYQKKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNASDRNSRFDKN 1667
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 5.537e-63 Identity = 129/248 (52.02%), Postives = 171/248 (68.95%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 ++ N+ +E E A QG SD + + LG VLS + +++Y SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF N Sbjct: 1586 KIKNRIQEAKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYAESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSLFNSLNWNGIDRNSVFCN 1831
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_NICSY (Putative membrane protein ycf1 OS=Nicotiana sylvestris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.537e-63 Identity = 129/248 (52.02%), Postives = 171/248 (68.95%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 ++ N+ +E E A QG SD + + LG VLS + +++Y SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF N Sbjct: 1586 KIKNRIQEAKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYAESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSLFNSLNWNGIDRNSVFCN 1831
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_ILLOL (Putative membrane protein ycf1 OS=Illicium oligandrum GN=ycf1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.589e-62 Identity = 132/256 (51.56%), Postives = 174/256 (67.97%), Query Frame = -2 Query: 52 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQ--SKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 813 S QKE+ EL Q++EE + D+ P SDAQ Q KD EE+ T SD K R KKK+ SK E +LDFFLKRY QLRW ++ +K +N+++VYC L+RL++P ++A+ASIQRGEM L + +K A+ EL K G+LI+EP RLS+K DGQF +YQ +GI+LVHK+K K +R +EK YVD+ FD I +H KM NR+K +YDLLVPE IL +RRRELR LI FNS+N+N + +NPVF N Sbjct: 1570 SYNQKEHLELETQNQEEKKRQDKKNPGSDAQNQ-----------KDVEEDSTRSDSKKRSKKKKPKSKSNKEAELDFFLKRYFLFQLRWDDPLN--QKRINNIKVYCLLLRLMDPKEIALASIQRGEMCLAAMKIQKDLAVTELIKKGILILEPVRLSIKWDGQFIMYQTIGISLVHKSKHKTNRRCREKRYVDENYFDISIEQHGKMLVNRDKKNYDLLVPENILSLRRRRELRILIRFNSENRNIVNRNPVFLN 1812
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_PANGI (Putative membrane protein ycf1 OS=Panax ginseng GN=ycf1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.364e-61 Identity = 123/253 (48.62%), Postives = 180/253 (71.15%), Query Frame = -2 Query: 52 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRET--EVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 804 +K+ EL N+++EE E AD+G SDAQ Q VLSNQ+KD EE+Y +K KKQSK ++ +V+L+ LK++L QLR+ + +++++N+++V C L+ L NP ++ ++SIQ E+SL I++ +K ++EL K G+LIIEP RLSVK DGQF +YQ +GI+L+HK+K + +RY+E+ Y+DKK FDE ++Q+ TGNR+KNHYD LVPE IL +RRRELR LI FNS+++ G+ NPVF N Sbjct: 1601 EKKIFELKNRNQEEKEPADRGDLGSDAQNQGNRRFVLSNQQKDIEEDYAKLVLKRGKTKKQSKNKSNVKVELNALLKQHLLFQLRYDEGL--KQRMINNLKVSCLLIGLKNPRNITVSSIQNREISLDIMLIRKSLTVRELMKRGVLIIEPIRLSVKKDGQFIMYQTIGISLIHKSKYQTNQRYREQRYIDKKKFDESTPRYQRRTGNRDKNHYDFLVPEKILSSRRRRELRILIHFNSRSRKGVDSNPVFCN 1851
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_ATRBE (Putative membrane protein ycf1 OS=Atropa belladonna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.364e-61 Identity = 124/248 (50.00%), Postives = 172/248 (69.35%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 ++ N+ +E E A+QG SD + +V G VLS + D E++Y SD K KKKQ K TE +LD FLKRYL QL+W ++ ++++ +++VYC L+RLINP+ ++I+S+QRGEMSL I++ + L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY+++ YVDKK+FDE I + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF N Sbjct: 1565 KIKNRIQEAKEPANQGERERGSDIENKVNPGPVLSKHQNDLEKDYAESDTKKSKKKKQYKSNTEAELDLFLKRYLLFQLKWNDDLN--QRMIENIKVYCLLLRLINPTKISISSVQRGEMSLDIMLIQGNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYRDQRYVDKKNFDESILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCN 1810
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_DIOEL (Putative membrane protein ycf1 OS=Dioscorea elephantipes GN=ycf1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 124/257 (48.25%), Postives = 170/257 (66.15%), Query Frame = -2 Query: 43 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 813 S QKEY E N ++E+NE QG RSD +KQ ++KD EEN+T S++K KKKQSK E +L FFLK+YL QLRW S ++++++++VYC L+RLIN ++ I+SIQRGEM L +++ +K AL EL K G+LIIEP RL ++ + +YQ +GI+L++KN+ +Y +K YVDKK FD +I ++ M N +KNHYD VPE IL P+RRRELR LICFNS N N + +NP F N K Sbjct: 1550 SSNQKEYLEFENSNQEKNEQQGQGDLRSDLRKQ---------KKKDVEENHTKSEIKKHKKKKQSKSNKEAELYFFLKKYLLFQLRWDD--SLNQRMIDNIKVYCLLLRLINTKEIVISSIQRGEMCLDVMLIQKDLALTELIKKGILIIEPIRLFLERGVKLIIYQTIGISLINKNQTN--GKYLKKRYVDKKSFDRYIGRYNNMLANGDKNHYDFFVPENILSPRRRRELRILICFNSCNWNVVDRNPAFCNENK 1793
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.038e-61 Identity = 129/254 (50.79%), Postives = 169/254 (66.54%), Query Frame = -2 Query: 58 PTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSV---LSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVF 810 P+ K+ + KE+ ADQ RSDAQKQ LGSV + QEKD EE+Y S +K KKKQ K +TE +LDFFLKRYL QLRW A++ ++++N++++YC L+RLINP + I+SIQR EMSL I++ +K +L EL K G+L+IEP RLSVKNDGQF +YQI+GI++VHKNK + + Y+E+ YVD KN +DLLVPE IL + RRELR LICF SKN+N + KN VF Sbjct: 1573 PSNKQIKNKNQNQKEKETPADQEDLRSDAQKQGNLGSVPPTKTKQEKDNEEDYAVSKIKAGKKKKQYKSKTEAELDFFLKRYLVFQLRWGDALN--QRMINNVKIYCLLLRLINPRKITISSIQRREMSLDIMLIQKNLSLTELIKRGVLVIEPDRLSVKNDGQFIMYQILGISVVHKNKHQTNQGYREQTYVD-------------------KNRFDLLVPENILSTRCRRELRILICFTSKNRNSVDKNSVF 1805
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CHLSC (Putative membrane protein ycf1 OS=Chloranthus spicatus GN=ycf1-A PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.968e-61 Identity = 130/256 (50.78%), Postives = 173/256 (67.58%), Query Frame = -2 Query: 52 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRI--KKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 813 S QKEY + Q+ EE EL Q SD + NQ+K EE+YTGSD+K R KKK SK EV+LDFFLKRYL QLRW S ++I+N++++YC L+RLINP+++AI+SIQ+GEM L ++ +K A EL K G+ IIEP RLS+K DG F++YQ VGI+LVHK+K +I +RY+EK YVD+ F+ A+H K+ N ++NHYDLL PE I +RR+E+R LI FNS N N + +NPVF N Sbjct: 1569 SSNQKEYLD---QNHEEKELLGQEDCGSDPR----------NQQKYIEEDYTGSDIKKRRSRKKKLSKSNEEVELDFFLKRYLFFQLRWD--YSLDQRIINNIKIYCLLLRLINPNEIAISSIQKGEMFLDVMAIQKDLAFTELRKKGIFIIEPLRLSIKWDGPFYMYQTVGISLVHKSKHQINRRYREKRYVDQNHFNRSTAQHGKILVNGDENHYDLLFPEKIPSTRRRKEMRILISFNSGNGNVVNRNPVFLN 1809
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_ARAHI (Putative membrane protein ycf1 OS=Arabis hirsuta GN=ycf1-A PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.968e-61 Identity = 128/244 (52.46%), Postives = 161/244 (65.98%), Query Frame = -2 Query: 49 NQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 780 N +KEENEL QG SD +K+ S LSNQEK+ E+NY S +K R KKQ K TE +L FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGE+SL IL+ +K F +L K G+LIIEP RLSVKNDGQ +Y+ VGI+LVHKNK+KI+KRY++K Y+DK KN+YD +PE IL PKRRRE R LICFN K +N +N F N Sbjct: 1488 NLNKEENELVGQGELESDNEKKRNPESALSNQEKNIEKNYAESKIKKRQNKKQYKSHTEAELYLFLTRYSRFQLRWN--CFFNQKILNNIKVYCLLVRLKNPNEIAISSIERGELSLDILMIEKNFTFSKLMKKGILIIEPVRLSVKNDGQLIIYRTVGISLVHKNKQKISKRYKKKSYIDK------------------KNNYDFFIPENILSPKRRREFRILICFNLKKKNARDRNSRFDKN 1711 The following BLAST results are available for this feature:
BLAST of CV712546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712546 ID=CV712546; Name=CV712546; organism=Citrus sinensis; type=EST; length=817bpback to top |