CV712546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_SOLBU (Putative membrane protein ycf1 OS=Solanum bulbocastanum GN=ycf1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.274e-59 Identity = 121/246 (49.19%), Postives = 164/246 (66.67%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW A++ +++L +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+LVHK+K + +RY+E+ YVDKK+FDEFI + Q N K H+DLLVPE IL +RRRELR FNS N N + +N VF N Sbjct: 1574 KIKNRSQETKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGQNKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMLENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKHNGQFIMYQTIGISLVHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFDLLVPENILWSRRRRELRIRSFFNSLNWNVVDRNSVFCN 1817
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.081e-58 Identity = 121/246 (49.19%), Postives = 164/246 (66.67%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW A++ +++L +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+LVHK+K + +RY+E+ YVDKK+FDEFI + Q N K H+DLLVPE IL +RRRELR FNS N N + +N VF N Sbjct: 1574 KIKNRSQETKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGQNKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--KRMLENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKHNGQFIMYQTIGISLVHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFDLLVPENILWSRRRRELRIRSFFNSLNWNVVDRNSVFCN 1817
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_SOLLC (Putative membrane protein ycf1 OS=Solanum lycopersicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.144e-58 Identity = 121/253 (47.83%), Postives = 167/253 (66.01%), Query Frame = -2 Query: 52 PTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 810 P+ K+ ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW GA++ +++ +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+L+HK+K + +RY+E+ YVDKK+FDEFI + Q N K H+ LLVPE IL +RRRELR FNS N N + +N VF N Sbjct: 1572 PSNKKI-KIKNRSQEAKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGKNKKQYKSNTEAELDLFLKRYLLFQLRWNGALN--QRMFENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKDNGQFIMYQTIGISLIHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFGLLVPENILWSRRRRELRIRSFFNSWNWNVVDRNSVFCN 1821
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_ACOCL (Putative membrane protein ycf1 OS=Acorus calamus GN=ycf1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.038e-57 Identity = 118/252 (46.83%), Postives = 172/252 (68.25%), Query Frame = -2 Query: 49 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 804 QK++ E+ NQ KE+ D P Q+ I+ NQ+KD EE+ GS +K R KKK+ K + E +LDFFLK+YL QLRW ++ +K++ +++VYC L+RL N ++AI+SI+RGEM L +++ +K +L+EL K G+ IIEP RLS K DG+ +YQ +GI+LV +NK I R ++KGY D+ F++ + + +KM +R++N YDLLVPE IL P+RRRELR LICFNS N++ + N VF+NN Sbjct: 1595 QKKHLEVENQEKEDFRQVDL-RPNPTNQRDPIVSDT-RNQQKDIEEDSVGSGVKKRRKKKKFKSKKEAELDFFLKKYLLFQLRWDELLN--KKMMTNIKVYCLLLRLKNLKEIAISSIERGEMCLDLMLMQKDLSLRELIKKGIFIIEPIRLSRKWDGKLIMYQTIGISLVAENKDPINIRCRKKGYADENSFNKSVRQQEKMLVDRDENDYDLLVPENILSPRRRRELRILICFNSGNESAVDGNSVFYNN 1842
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_ACOAM (Putative membrane protein ycf1 OS=Acorus americanus GN=ycf1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.038e-57 Identity = 118/252 (46.83%), Postives = 172/252 (68.25%), Query Frame = -2 Query: 49 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 804 QK++ E+ NQ KE+ D P Q+ I+ NQ+KD EE+ GS +K R KKK+ K + E +LDFFLK+YL QLRW ++ +K++ +++VYC L+RL N ++AI+SI+RGEM L +++ +K +L+EL K G+ IIEP RLS K DG+ +YQ +GI+LV +NK I R ++KGY D+ F++ + + +KM +R++N YDLLVPE IL P+RRRELR LICFNS N++ + N VF+NN Sbjct: 1595 QKKHLEVENQEKEDFRQVDL-RPNPTNQRDPIVSDT-RNQQKDIEEDSVGSGVKKRRKKKKFKSKKEAELDFFLKKYLLFQLRWDELLN--KKMMTNIKVYCLLLRLKNLKEIAISSIERGEMCLDLMLMQKDLSLRELIKKGIFIIEPIRLSRKWDGKLIMYQTIGISLVAENKDPINIRCRKKGYADENSFNKSVRQQEKMLVDRDENDYDLLVPENILSPRRRRELRILICFNSGNESAVDGNSVFYNN 1842
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_NANDO (Putative membrane protein ycf1 OS=Nandina domestica GN=ycf1 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.540e-57 Identity = 131/256 (51.17%), Postives = 166/256 (64.84%), Query Frame = -2 Query: 52 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEEN----YTG-SDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 804 QK+ EL N KEE + Q SD QKQ GS S Q+KD ++N Y G SD++ R KKKQS +LD FLKRY QLRW ++ +KI+N+++VYC L+RL NP ++AIASIQR EMSL ++ K L +L GMLIIEP RLS+K DGQF LYQ + I+ VHKNK + +RYQEK VDK ++ IA+H+K+ GNR+KN LLV E IL +RRRELR IC NS N N + +NPVF N Sbjct: 1524 QKKSLELKN--KEEKKKPAQENIGSDTQKQGNPGSDPSTQQKDIKKNVKEDYDGRSDIQKRKKKKQSTGNIAAELDLFLKRYFLFQLRWDNPLN--KKIINNVKVYCLLLRLKNPKEIAIASIQRDEMSLDVMPISKTLTLAKLINKGMLIIEPARLSIKRDGQFLLYQTITISRVHKNKHQTNQRYQEKRNVDKNGLEKSIARHEKLVGNRDKN--PLLVLENILSSQRRRELRIRICLNSGNVNVVDRNPVFCN 1773
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_DRANE (Putative membrane protein ycf1 OS=Draba nemorosa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.725e-56 Identity = 126/256 (49.22%), Postives = 161/256 (62.89%), Query Frame = -2 Query: 13 NQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTK 780 N +KEEN LA QG SD +KQ SVL NQEK+ +ENY S +K R KKQ K TE +L+ FL RY QLRW ++ +KI+N+++VYC LVRL NP+++ I+ I+RGE+SL IL+ +K F +L K GMLI+EP RLSVKNDGQ +Y+ +GI+LVHKNK KI+KRY+ +DK KN+YD +PE IL PKRRRE R LICFN K +N +N F N K V K K Sbjct: 1493 NLNKEENGLAGQGELESDNEKQRNPESVLLNQEKNIDENYAESKIKKRQNKKQYKSNTEAELELFLTRYSRFQLRWNCFLN--QKIINNIKVYCLLVRLKNPNEITISCIERGELSLDILMIEKNFTFTKLMKKGMLIVEPVRLSVKNDGQLIIYRTIGISLVHKNKPKISKRYKN---IDK------------------KNNYDCFIPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIKNLTTVLHKKK 1725
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_LEMMI (Putative membrane protein ycf1 OS=Lemna minor GN=ycf1 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.556e-56 Identity = 122/260 (46.92%), Postives = 177/260 (68.08%), Query Frame = -2 Query: 52 QKEYSELSNQSKEENELA----DQGTP-RSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKR--KITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQN--GMQKNPVFFN 804 +KEY EL NQ+++E + D G+ + D QKQ +++DGE+NYT S +K R KKKQ K + E +LDFFLK+Y QLRW S ++++N+++VYC L+RLIN ++AI+SIQRGEM L +++ +K +L EL K G+ IIEP RLS+K D +FF+YQ +GI+LV+K+K+ + +RY +K Y+D+ FD+ I++H M + +KN+YDL VPE IL +RRRELR LICFNS N + +N +FFN Sbjct: 1591 KKEYLELENQNQQEKKQKLSQRDLGSDTQQDTQKQ--------KKKEDGEKNYTESTIKKRRKKKQFKSKKEAELDFFLKKYFLFQLRWDD--SLNQRMINNIKVYCLLLRLINLKEIAISSIQRGEMRLDVMLIQKDLSLTELIKRGIFIIEPVRLSIKWDEEFFIYQTLGISLVNKSKQQSETDRRYIQK-YLDENPFDKSISRHSTMLVSEDKNYYDLFVPENILSTRRRRELRILICFNSWKGNVVDVDRNFIFFN 1839
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_NUPAD (Putative membrane protein ycf1 OS=Nuphar advena GN=ycf1 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.461e-55 Identity = 116/254 (45.67%), Postives = 162/254 (63.78%), Query Frame = -2 Query: 43 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 804 QKEY EL N++++E E QG SD + NQ+KD N TGSD+K R KKK+ K + E +LD LK+Y QLRW SF +++ N+++VYC L+RL++PS++AI+SI+RGEM L +++ K +L EL K G+ IIEP RLS K DG +YQ + I+L HK + + + YQ K ++D+ F+ IA H + N + N+YDLLVPE IL P RRE R + FN +N+N + KNPVFFN K Sbjct: 1558 QKEYLELENRNRDEKERQHQGNLISDTR----------NQKKDVGANSTGSDIKKRRKKKKFKSKKEAELDLLLKKYFLFQLRWGD--SFNQRMTNNIKVYCLLLRLMDPSEIAISSIERGEMGLDVMLIHKDLSLPELIKRGIFIIEPVRLSTKWDGISIMYQTIAISLTHKVQHQTNRGYQAKKHIDENYFNGSIACHGGVRVNGDNNNYDLLVPENILSPNHRREFRIISRFNYRNRNVVNKNPVFFNRAK 1799
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_NYMAL (Putative membrane protein ycf1 OS=Nymphaea alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.615e-54 Identity = 115/254 (45.28%), Postives = 161/254 (63.39%), Query Frame = -2 Query: 43 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 804 QK Y EL N++++E E QG SD + N++KD N GSD+K R KKK+ K + E +LD FLK+Y QLRW F + + N+++VYC L+RL+NP+++AI+SIQ GEM L +++ + F+L EL K G+ +IEP RLS+K DG +YQ + I+L HK + + + YQ K Y+DK F+ IA+H + N + N+YDLLVPE IL P RRELR L FN +N+N + KNPVF N K Sbjct: 1647 QKGYLELENRNRDEKERQHQGNLISD----------IRNKKKDVGANSAGSDIKKRRKKKKFKSKKEAELDLFLKKYFIFQLRWDDP--FNKGMNNNIKVYCLLLRLMNPNEIAISSIQSGEMGLDVMLINRGFSLPELIKKGIFLIEPVRLSIKRDGISIMYQTIAISLTHKIQHQTNQGYQLKKYIDKNYFNGSIARHGGVRVNGDNNNYDLLVPEHILSPSHRRELRILSRFNYRNRNLVNKNPVFCNRAK 1888 The following BLAST results are available for this feature:
BLAST of CV712546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712546 ID=CV712546; Name=CV712546; organism=Citrus sinensis; type=EST; length=817bpback to top |