CV712546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CERDE (Putative membrane protein ycf1 OS=Ceratophyllum demersum GN=ycf1 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.367e-53 Identity = 116/257 (45.14%), Postives = 162/257 (63.04%), Query Frame = -2 Query: 49 SPTQKEYSELSNQSKEENELADQ--GTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 813 S K+Y EL N + +E E + G S+ + + LG L NQ+K+ E +Y GSD+K R KKKQ E +LD L YL QLRW ++ + I+ +++V C L+RLINP ++AI SIQ GEM L ++ ++ +L +L K G+ +IEPRRLS+K DGQF YQ +GI+LVHK K + + Y E Y+D+ DF I++H KM N ++NHYDL+VPE IL +RRRELR C NS N +NPVFF++ Sbjct: 1578 SSNPKDYLELDNGTPKEKEKQGKVKGNLGSNQKTRENLGLDLRNQQKNVENDYVGSDIKKRRKKKQFNNNKETELDSILTNYLVFQLRWNPFLN--KGIMKNIKVDCLLLRLINPKEIAIDSIQSGEMHLDLMSIQRDPSLTKLIKDGIFVIEPRRLSIKRDGQFIKYQTIGISLVHKRKYQTNRGYPENKYIDENDFYGSISQHGKMFVNGDENHYDLIVPENILSTRRRRELRIRNCLNSGNTE--NRNPVFFDS 1830
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_LOBMA (Putative membrane protein ycf1 OS=Lobularia maritima GN=ycf1-A PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53 Identity = 114/251 (45.42%), Postives = 152/251 (60.56%), Query Frame = -2 Query: 49 KEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 801 K++ E N +KEE E A QG SD +K+ L S LS QEK+ EENY +K KKQ K TEV++D F+ R Q+RW F +KI+ ++VYC LVRL NP+++ ++SI+RGE++ IL+ K +L K GM + EP RLS+KNDGQ +Y+ +GI+LVHK K KI+KRY++K Y+DK KN+ D VPE IL PKRRRE R LICFN K +N +N F N Sbjct: 1478 KKFLEFFNLNKEEKESAGQGERESDNEKKKNLESALSKQEKNIEENYAELKIKKHKTKKQHKSNTEVEIDSFMGRDSRFQMRWNSF--FNKKIITTLKVYCFLVRLKNPNEIILSSIERGEINPDILLISKTLPFSQLLKKGMWVFEPVRLSLKNDGQLIIYRTIGISLVHKKKNKISKRYKKKSYIDK------------------KNNCDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFDKN 1708
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_AETCO (Putative membrane protein ycf1 OS=Aethionema cordifolium GN=ycf1-A PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.332e-53 Identity = 120/254 (47.24%), Postives = 159/254 (62.60%), Query Frame = -2 Query: 13 SKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTK 774 S E+ L + +KQ L NQEK+ EENY S +K R KKQ K TEV+LD FL RY QLRW ++ +KILN++++YC LVRL NP+ +AI+SI+RGEMSL IL+ +K +L K G+LIIEP R SVKNDGQ +Y+ +GI+LVHKN +I++R DKK ++ I + +K T NR KN+YD VPE IL PKRRRE R LIC K ++ +N F N + G+V +TK Sbjct: 1474 SNEKKYLRFYNLTNDEKEKQRNPQLALPNQEKNIEENYAESKIKKRQNKKQYKSNTEVELDLFLTRYSRFQLRWNFFLN--KKILNNVKIYCLLVRLKNPNKIAISSIERGEMSLDILMIEKNLTFAKLMKKGILIIEPLRSSVKNDGQLIIYRTIGISLVHKNNHQISQR-------DKKKIEKSITQLKKKTVNRKKNNYDFFVPEKILSPKRRREFRILICSKLKKKSTRYRNSRFDKNIQNCGQVLNQTK 1718
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_AETGR (Putative membrane protein ycf1 OS=Aethionema grandiflora GN=ycf1-A PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.861e-53 Identity = 116/244 (47.54%), Postives = 156/244 (63.93%), Query Frame = -2 Query: 28 ELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRV 759 E ADQG SD +KQ L NQEK+ EENY S +K KKQ K TEV+LD FL RY QLRW ++ KILN++++YC LVRL NP+++AI+SI+R EM+L +L+ +K F +L K G+LIIEP RLSVKNDGQ +Y+ +GI+LVHKN +I++R +KK ++ I K++K T NR K + D PE +L PKRRRE R LIC K ++ +N F N + G+V Sbjct: 1496 ESADQGELESDNEKQRNPELALPNQEKNIEENYAESKIKKPENKKQYKPNTEVELDLFLTRYSRFQLRWNFFLN--TKILNNIKIYCLLVRLKNPNEIAISSIERAEMNLDLLMIEKNFTFAKLMKKGILIIEPLRLSVKNDGQLIIYRTIGISLVHKNNHQISQR-------EKKKIEKAITKYKKKTVNRKKKNSDFFAPENLLSPKRRREFRILICSKFKTKSTRYRNSRFDKNIQNCGQV 1730
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1B_PIPCE (Putative membrane protein ycf1 C-terminal part OS=Piper cenocladum GN=ycf1 PE=5 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.861e-53 Identity = 119/253 (47.04%), Postives = 161/253 (63.64%), Query Frame = -2 Query: 43 KEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 801 K+Y N ++EE E Q RS+AQ Q Q+ E++Y SD++ K QSK E +LD FLK+YL QLRW S +K++++++VY L+RL NP ++AI+SIQRGEM L +++ +K L L KGG+L+IEP RL +K D QFF+YQIVGI+LVHK+K++I R + K YVDK DFD + K ++ HYDLLVPE IL P+RRRELR L+ FNS +N M + P F NGK Sbjct: 1227 KKYPVFKNINQEEKEGQGQEVLRSNAQNQ---------QKSFIEKDYKESDIQKPRTKAQSKNNKETELDSFLKKYLLFQLRWNN--SLNQKVIDNIKVYSLLLRLKNPREIAISSIQRGEMRLDVMLFQKDITLSGLIKGGLLVIEPIRLYLKWDFQFFMYQIVGISLVHKDKQQIKTRCRIKEYVDKMDFDGSFLPYGKTLVKGHEKHYDLLVPEHILSPRRRRELRILMSFNSGKENIMGRGP-FILNGK 1467
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_SPIOL (Putative membrane protein ycf1 OS=Spinacia oleracea GN=ycf1-A PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50 Identity = 113/250 (45.20%), Postives = 158/250 (63.20%), Query Frame = -2 Query: 61 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGS-DMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKIT-KRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPV 804 +K+ EL N++++E EL K+ + V N EKD EE+Y D+K IK+KQ K E + D FLKRYL QL+W A S EK+++++QVYC ++RLINP ++ I+SI+R E+S+ I++ +K F + +LIIEP RLS++ DGQF LYQ +GI+LVHK+K + KRY E VDK K G RNKN++DLL PE +L P+RRRELR L+C NS+N NG+ NP+ Sbjct: 1541 EKKSFELENRNQDEKELVS---------KEDLGSYVQENYEKDIEEDYISFIDIKKPIKQKQPKSVIEAEFDLFLKRYLLFQLKW--ADSLNEKLMDNIQVYCLVLRLINPIEILISSIERKELSMDIMLDRKDFNCPNWKQKRVLIIEPIRLSIRGDGQFLLYQTIGISLVHKSKHQNNQKRYSEN--VDK-----------KFLGERNKNNFDLLAPENLLSPRRRRELRILLCLNSRNNNGVNTNPM 1766
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_SOYBN (Putative membrane protein ycf1 OS=Glycine max GN=ycf1-A PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.668e-49 Identity = 111/272 (40.81%), Postives = 164/272 (60.29%), Query Frame = -2 Query: 43 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTR---IKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFAL----------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 813 S +K + E EL + +++ Q L S +SNQEKD E +Y GSD + IKKK+ K + E +L+F L+ +L L L W + ++I N+++VYC L+RL N ++ IASIQRGE+ L I++ + + L + K + +IEP RLS KN+ QFF+YQ +G++L+ KNKRKI +Y EK +V+KK+F ++I + QK+T + K++ DLLVPE IL +RRRELR LIC N N N M +N +F+N K Sbjct: 1455 SENKKNITRKKKNESLELELETRNRAKAEYPDQRNLESSISNQEKDIENDYVGSDSEKNSKGIKKKKDKNKMEAELNFLLRNFLILHLNWNNFLG--QRIFNNVKVYCLLIRLKNLREITIASIQRGELGLDIMMIQNQKNLILLGLRKKKNNKFMKKEIFVIEPVRLSRKNNKQFFMYQTIGLSLIQKNKRKIYHKYPEKIHVNKKNFYKYITRTRDQKITEKKEKDNSDLLVPENILSARRRRELRILICLNPNNINSMHRNTIFYNPNK 1724
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_RANMC (Putative membrane protein ycf1 OS=Ranunculus macranthus GN=ycf1 PE=3 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 2.761e-46 Identity = 102/246 (41.46%), Postives = 153/246 (62.20%), Query Frame = -2 Query: 52 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 789 +L N+++EE + +G S QK+ GS ++ DG+E++ S+++ I KK+SK +LDFFLK+Y QLRW SF EKI+N++++YC L+RL NP ++AI+SIQR EMS+ +++ K +L K +L+IEP RLS+ DG F +YQ + I VH +K + K+ K VD K E +A+H+ + NR+KN+YD L+PE +L +RRRELR IC N +N +N F N Sbjct: 1482 DLENRNQEETQQPVRGDLGSYVQKENNPGSDPLKKQTDGKEDFDRSNIQRNINKKKSKSNIAAELDFFLKKYFLFQLRWDN--SFSEKIINNIKIYCLLLRLKNPKEIAISSIQRDEMSMDVMLVPKATTFIKLRKRRLLLIEPARLSINWDGLFIMYQTLVILQVHNSKYQTCKK---KINVDNKGLIESMARHEILFRNRDKNNYDFLIPENLLSSRRRRELRIQICLNLRNFKVGDRNREFSN 1722
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_DAUCA (Putative membrane protein ycf1 OS=Daucus carota GN=ycf1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.151e-46 Identity = 107/255 (41.96%), Postives = 155/255 (60.78%), Query Frame = -2 Query: 52 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRW---RGAV-SFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 804 +K Y EL N+++EE + A + RS AQ NQ+K MK + K + R ++ F K YL Q W G + E+++N++++YC+L+ L NP D I+SIQR E++L I++ ++K EL K G+ ++P RLSVKNDG F +YQ VGI+LVHK+K + +RY+E+ Y++KK DE I ++Q + R+K HYD +VPE IL +RRRELR L+ FNSKN N + KNPVF N Sbjct: 1529 EKIYYELMNRNQEEKKTAGRRGLRSYAQ----------NQDK----------MKKKYKIRNKMRR---EIIFLRKHYLLFQ--WIIDDGLIPKLTERMINNIKIYCYLLGLRNPRDTTISSIQRKELNLDIMVIRQKLTPIELNKKGIFFLDPTRLSVKNDGYFIIYQTVGISLVHKSKYQTPQRYREQRYINKKKLDESIPRYQIILRKRDKKHYDFVVPENILSSRRRRELRILLSFNSKNLNSVDKNPVFCN 1758
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_AMBTC (Putative membrane protein ycf1 OS=Amborella trichopoda GN=ycf1 PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.800e-45 Identity = 109/266 (40.98%), Postives = 158/266 (59.40%), Query Frame = -2 Query: 43 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQE--------KDG----EENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 804 QK+Y EL + +EE + DQ R D + Q GS + NQ+ ++G +E+YT D+ KKKQSK E +LD LKRYL Q RW S ++K++N++++Y L+RL++P + I+SIQRGEM L I++ K L +L KGG+ +EP RLS K +GQF +YQ + I+LVHK K++ +RY+E Y+D+ FD FI ++ ++ N + +YDL VPE I +RRRELR L N N N +F N K Sbjct: 1469 QKKYLELGTRDREEKKWWDQEDLRPDTKYQEYFGSDVKNQKDVELDVWYREGKSREQEDYT--DINKSRKKKQSKSNKEAELDLLLKRYLLFQFRWDD--SLKKKMINNIKLYSLLLRLMDPKKIVISSIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWNGQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNPGKGN---INIIFSNRKK 1727 The following BLAST results are available for this feature:
BLAST of CV712546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712546 ID=CV712546; Name=CV712546; organism=Citrus sinensis; type=EST; length=817bpback to top |