CV712546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CUSOB (Putative membrane protein ycf1 OS=Cuscuta obtusiflora GN=ycf1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17 Identity = 71/282 (25.18%), Postives = 132/282 (46.81%), Query Frame = -2 Query: 13 SKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKK---QSKRETEVQ-------------LDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPI----------LITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQ--NGMQKNPVFFNNGKGGGRVWIKTK 774 +K ++ +Q T + + + + + + N+E EN ++ K + K K + +ETE Q + F+K++L QLR G F++ ++Q+ C L+RL+N +++ +SIQR +++L I L ++ + E K + EP L + +G+F +YQ++ ++LVHK K + +G + + + +A H +PE IL +RRRELR L+C N K + G + F+ K ++W + K Sbjct: 1367 NKLSSQQQNQTTTKINTETKNQQKNRVENEENKETENQQNAETKNKQKSKTENEENKETENQQNDESEDDPQLAYIRSFMKKHLLFQLR--GESIFKKSGFKNIQILCLLLRLMNQNEMLFSSIQREKLNLHIMPEIGIKDLTLEVLEEIGVPEFLKEKRVNFEPFPLYINKNGKFLIYQLLNMSLVHKIKYPTNNESRNQGVITTQKNNN-VASH---------------IPENILSSRRRRELRILMCLNKKKKKCKGTEATNKSFSYKKKCAKIWEEQK 1630
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CUSGR (Putative membrane protein ycf1 OS=Cuscuta gronovii GN=ycf1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 69/256 (26.95%), Postives = 121/256 (47.27%), Query Frame = -2 Query: 97 SKEENELADQ-GTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKK---QSKRETEVQ-------------LDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELT-------------KGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFN 774 SK++N+ + T + QK S + N++ EN ++ K + K K + +ETE Q + F+K++L QLR G F++ ++Q+ C L+RL+N +++ +SIQR +++L I+ + +KELT K + EP L + +G+F +YQ++ ++LVH K + +G + + K+ M + +PE IL +RRRELR L+C N Sbjct: 1368 SKQQNQTTTKMNTETKNKQK-----SKVENEKNKKTENQQNAETKNKQKSKTENEGNKETENQQNDESEDDPQLAYIRSFMKKHLLFQLR--GESIFKKSGFKNIQILCLLLRLMNQNEMLFSSIQRQKLNLHIM---PEIGIKELTLEVLEEIGVPEFLKEKRVNFEPFPLYINKNGKFLMYQLLNMSLVHNIKYPTNNESRNQGVITTQ-------KNNNMASH---------IPENILSSRRRRELRILMCLN 1597
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_OENEH (Putative membrane protein ycf1 OS=Oenothera elata subsp. hookeri GN=ycf1 PE=3 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12 Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = -2 Query: 28 IASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKN-DGQFFLYQIVGIALV-------HKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNS---KNQNGMQKNPVFFNNGKGGGRV 462 ++SI+R + + A LT G + IEP R+S +N D F +YQ++ I+LV H + ++T++Y+ + ++F F+ K T +K+ DL VPETIL KRRRELR LI F S K +N + KNPVF+ K G V Sbjct: 2263 LSSIKRERLKMEFSTRNNSLATIMLTHG-IFSIEPLRISRQNQDASFLIYQLIKISLVEQLDPYDHNDSFELTEKYRAR-----RNF--FMPKTNAET--MHKSDSDLFVPETILSTKRRRELRILISFYSRRGKRKNRIYKNPVFWKYVKNCGEV 2408 The following BLAST results are available for this feature:
BLAST of CV712546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712546 ID=CV712546; Name=CV712546; organism=Citrus sinensis; type=EST; length=817bpback to top |