CV712545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 6.165e-36 Identity = 70/96 (72.92%), Postives = 87/96 (90.62%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 291 R G L+E++ KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+GGGRPGR KR+ + Sbjct: 82 RLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRL 177
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_CAEEL (40S ribosomal protein S9 OS=Caenorhabditis elegans GN=rps-9 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.219e-35 Identity = 69/96 (71.88%), Postives = 85/96 (88.54%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 291 + G L+E++ KLDYVL L VE+FLERRLQT VFK G+AKSIHHAR+LI+Q HIRV RQ+V++PSF+VR+DSQKHI+FSL SP+GGGRPGRVKRR + Sbjct: 82 KIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTL 177
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9B_YEAST (40S ribosomal protein S9-B OS=Saccharomyces cerevisiae GN=RPS9B PE=1 SV=4) HSP 1 Score: 145.591 bits (366), Expect = 1.163e-34 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 288 R G L E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 82 RVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9A_YEAST (40S ribosomal protein S9-A OS=Saccharomyces cerevisiae GN=RPS9A PE=1 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 1.163e-34 Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 288 R G L E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 82 RVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_DICDI (40S ribosomal protein S9 OS=Dictyostelium discoideum GN=rps9 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.286e-33 Identity = 66/95 (69.47%), Postives = 83/95 (87.37%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRR 285 H+ G +EES+NKLDY+L L V++F+ERRLQTLVFK+G+AKSIHHARVLI+ RHIRVG+QLVN+PSF+VRV+SQKH+ + TSP GGRPGR R+ Sbjct: 78 HKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRRARK 172
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_TRYBB (Probable 40S ribosomal protein S9 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.088e-32 Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKR 282 H YGFL+E ++KLDYVL+LTV + LERRLQT+VFK G+AKS+HH+RVLI+QRHI V +Q+V IPSF+VRV S+ HI F+ SPFG GRPGRVKR Sbjct: 80 HGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRVKR 173
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_NAEFO (40S ribosomal protein S9 OS=Naegleria fowleri GN=RPS9 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.522e-26 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFS-LTSPFGGGRPGRVKRRNI 291 R G L+ES+ +LDY+L+L E+ LERRLQT+V K G++KSIHHAR LI QRHIRVG+Q VN+PSF+VRVDS+KHI S ++ GG+PGR+ R+ + Sbjct: 84 RLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGRMTRKKL 180
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_TOBAC (40S ribosomal protein S9 (Fragment) OS=Nicotiana tabacum GN=RPS9 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.414e-24 Identity = 50/58 (86.21%), Postives = 57/58 (98.28%), Query Frame = 1 Query: 115 AKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 288 AKS+HHARVLIRQRHIRVGRQ+VN+PSF+VR+DSQKHI+FSL SPFGGGRPGRVKR+N Sbjct: 1 AKSVHHARVLIRQRHIRVGRQVVNVPSFMVRLDSQKHIDFSLISPFGGGRPGRVKRKN 58
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS9_ENTHI (40S ribosomal protein S9 OS=Entamoeba histolytica GN=2.t00127 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.274e-22 Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGR-PGRVKRRN 288 H G L QNKL++VLAL EN LERRLQTLV++ G AKSIHHARVLIR + I+VG+Q+V++PSF+VRV+S+ I+ + +P GR KR+N Sbjct: 81 HNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKN 177
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULAC (30S ribosomal protein S4P OS=Sulfolobus acidocaldarius GN=rps4p PE=3 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGR 273 +R G LE+ + LD +L+LT EN+LERRLQT+V+K G+A++I+ AR LI HI + + V P +VV + I++ TSPF P + Sbjct: 78 YRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLITHGHIAISGRKVTSPGYVVLRGEEDLIDYYPTSPFKQNPPSQ 168 The following BLAST results are available for this feature:
BLAST of CV712545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712545 ID=CV712545; Name=CV712545; organism=Citrus sinensis; type=EST; length=494bpback to top |