CV712545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_PYRAE (30S ribosomal protein S4P OS=Pyrobaculum aerophilum GN=rps4p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVV 204 ++ GF+E+ +LD +L+L V LERRLQT+V++ G+AKSIHHAR LI H+ V + V P F+V Sbjct: 80 YKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLV 147
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_METMP (30S ribosomal protein S4P OS=Methanococcus maripaludis GN=rps4p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11 Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSP 249 RY L E + LD+VL+L +E+ LERRLQT+VF+ G+AK+ AR I HI V + V P++++ V IE+ SP Sbjct: 79 RYAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISVAENDAIEYVSNSP 160
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIY (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIN (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIM (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIL (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIK (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_SULIA (30S ribosomal protein S4P OS=Sulfolobus islandicus (strain M.16.27) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 267 + G L+ +D +L+LT ++ LERRLQT+V+K G+A + + AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 79 KMGLLKRETATVDDILSLTEQDLLERRLQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_METM6 (30S ribosomal protein S4P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSP 249 RY L E + LD+VL+L +E+ LERRLQT+V++ G+AK+ AR I HI V + V P+++V V IE+ SP Sbjct: 79 RYAILVEQEPTLDHVLSLDIESILERRLQTIVYRKGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSVAENDAIEYVPNSP 160
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_THEPD (30S ribosomal protein S4P OS=Thermofilum pendens (strain Hrk 5) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSP 249 ++ G L LD VL+LTV + LERRLQT+V++ G+A +I HAR LI HI V + V P ++V D + I + SP Sbjct: 78 YKMGLLPSEDASLDDVLSLTVRDVLERRLQTIVYRKGLATTIRHARQLITHGHIAVNSRRVRSPGYLVSRDEENFISYYEGSP 160 The following BLAST results are available for this feature:
BLAST of CV712545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712545 ID=CV712545; Name=CV712545; organism=Citrus sinensis; type=EST; length=494bpback to top |