CV712545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_AERPE (30S ribosomal protein S4P OS=Aeropyrum pernix GN=rps4p PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF 252 +R G ++ +D VL + E LERRLQT+V+K G+AK+I+ AR L+ HI + + V P ++V + +K I+++ SPF Sbjct: 78 YRMGLIDNPNVDIDEVLGINAEKVLERRLQTIVYKKGLAKTIYQARQLVVHGHIAIAGRRVTSPGYLVSREEEKLIDYAPGSPF 161
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_THENV (30S ribosomal protein S4P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVV 204 ++ GF+E+ LD VL+L V LERRLQT+V++ G+AKSI+HAR LI HI V + V+ P F+V Sbjct: 80 YKMGFIEDPNVPLDRVLSLDVRAILERRLQTIVYRMGLAKSIYHARQLIVHGHIAVAGRRVSSPGFLV 147
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_PYRIL (30S ribosomal protein S4P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 1 HRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHI 228 ++ GF+E+ LD +L+L V LERRLQT+V++ G+AKSI+HAR L+ H+ V + V P F+V D + I Sbjct: 80 YKMGFIEDPNVPLDRILSLDVRAILERRLQTIVYRKGLAKSIYHARQLVVHGHVAVAGRRVTSPGFLVPRDLEDKI 155
BLAST of CV712545 vs. ExPASy Swiss-Prot
Match: RS4_METLZ (30S ribosomal protein S4P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps4p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 4 RYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKR 282 RYG L +D +L+L VE+ LERRLQT+V++ G+A+S AR LI HI + Q V++PS++V + + I + TS G G +R Sbjct: 84 RYGLLGPDA-AMDNILSLKVEDILERRLQTIVYRKGLARSPKQARQLITHGHIAINGQRVSVPSYMVSIAEEAGIMYYATSSLGDEANGERQR 175 The following BLAST results are available for this feature:
BLAST of CV712545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712545 ID=CV712545; Name=CV712545; organism=Citrus sinensis; type=EST; length=494bpback to top |