CV712503

Overview
NameCV712503
Unique NameCV712503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 348.206 bits (892), Expect = 2.777e-95
Identity = 174/231 (75.32%), Postives = 200/231 (86.58%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 746
            RE+ VY+AKLAEQAERY+ MV+ MK VA+ D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN   V+ IKEYRQK+E EL  I  DI+ V+++HLIP+    ES VFYYKMKGDYYRYLAEF  G++R+  AD S++ Y+AAS  A AEL+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+LSEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:    6 REDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.627e-95
Identity = 172/229 (75.11%), Postives = 202/229 (88.21%), Query Frame = 3
Query:   57 ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 743
            E+ VY+AKLAEQAERY+EMV+ MK VA+ D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE++GN   V  IKEYRQK+E EL+KI  DI++V+D+HLIPS   GES VFY+K+KGDY+RYLAEF  GD RKD AD S++AY+AA+  A+ EL PTHPIRLGLALNFSVFYYEI+N+P++ACHLAKQAFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 232          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.627e-95
Identity = 181/234 (77.35%), Postives = 199/234 (85.04%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE     IKEYR K+E ELSKI   I++++D HL+PS T  ES VFY KMKGDYYRYLAEFKTG ERKD A+ +M AY+AA   A AEL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 242          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.055e-94
Identity = 179/234 (76.50%), Postives = 204/234 (87.18%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVAN-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA  +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE RGNE +V  IKEYR K+EAELSKI   I++++D HL+PS T  ES VFY KMKGDY+RYLAEFKTG ERK+ A+ +M AY+AA   A A+L+PTHPIRLGLALNFSVFYYEI+NSP++AC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDL 236          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.378e-94
Identity = 179/234 (76.50%), Postives = 200/234 (85.47%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE  V  IK+YR K+E EL+KI   I+++++ HL+PS T  ES VFY KMKGDYYRYLAEFKTG ERKD A+ +M AY+AA   A AEL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 242          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 2.351e-94
Identity = 179/234 (76.50%), Postives = 199/234 (85.04%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE RGNE  V  IK+YR K+E EL+KI   I+++++ HL+PS T  ES VFY KMKGDYYRYLAEFKTG ERKD A+ +M AY+AA   A AEL+PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 241          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.238e-94
Identity = 178/234 (76.07%), Postives = 199/234 (85.04%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE  V  IK+YR K+E EL+KI   I++++D HL+PS T  ES VFY KMKGDYYRYLAEFK+G ERKD A+ +M AY+AA   A AEL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELD+LSEESYKDSTLIMQLLRDNLTLWTSDI
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDI 242          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 6.841e-94
Identity = 171/233 (73.39%), Postives = 200/233 (85.84%), Query Frame = 3
Query:   42 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWT 740
            M   RE+ VY+AKLAEQAERY+EMV+ MK VA+   EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEEA+GNE  V  I++YR K+EAELSKI  DI+ V+ +HLI S   GES VFYYKMKGDY+RYLAEF   ++RK+ ADLS++AY+AAS  A  EL PTHPIRLGLALNFSVFYYEI+NSP+RACHLAKQAFD+A+++L+TLSE+SYKDSTLIMQLLRDNLTLWT
Sbjct:    1 MPASREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWT 233          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 6.841e-94
Identity = 178/234 (76.07%), Postives = 198/234 (84.62%), Query Frame = 3
Query:   54 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI 749
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE RGNE  V  IK+YR K+E EL+KI   I+++++ HL+PS T  ES VFY KMKGDYYRYLAEFKTG ERKD A+ +M AY+AA   A AEL+PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTLSEESYKDSTLIMQLL DNLTLWTSDI
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDI 241          
BLAST of CV712503 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 8.934e-94
Identity = 173/235 (73.62%), Postives = 199/235 (84.68%), Query Frame = 3
Query:   42 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 746
            M   REN VY+AKLAEQAERY+EMV+ MKKVA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE+RGN      IKEYR+K+E ELS I  D++ V+++HLIP+ T GES VFYYKMKGDYYRYLAEF  G+  K+ AD S++AY+AAS  A AEL PT P+RLGLALNFSVFYYEI++SPE ACHLAKQ FDEAISELD+LSEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:    1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 235          
The following BLAST results are available for this feature:
BLAST of CV712503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
RAD24_SCHPO2.777e-9575.32DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433_TRIHA3.627e-9575.1114-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
14335_ORYSJ3.627e-9577.3514-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14333_ORYSJ1.055e-9476.5014-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_ORYSJ1.378e-9476.5014-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14331_MAIZE2.351e-9476.5014-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433B_HORVU5.238e-9476.0714-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
1433_CANAL6.841e-9473.3914-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
14332_MAIZE6.841e-9476.0714-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
RAD25_SCHPO8.934e-9473.62DNA damage checkpoint protein rad25 OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H17_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712503 ID=CV712503; Name=CV712503; organism=Citrus sinensis; type=EST; length=750bp
TCTCACATTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAA
GATCGTGAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACG
ATACGACGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGG
AACTGACTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTG
ATTGGTGCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAA
AGAAGAGGCCAGAGGGAATGAACTTAATGTGAAAAGAATTAAAGAGTATA
GGCAAAAGGTGGAAGCTGAGCTGTCGAAGATCAGCACTGATATTATGCAA
GTCATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGT
GTTTTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCAGAGTTTA
AGACTGGTGATGAGAGGAAAGATGTTGCTGATCTGTCAATGAAAGCCTAT
CAGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCAT
CCGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGA
ACTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCC
ATCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTT
GATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATAC
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