CV712491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: TM41B_XENTR (Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.161e-23 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 220 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEK 513 K+K+PR + D + L L+ Y + V ++ Y +TYIF+QTF IPG+IF+S+L+G L+ L LV + GAS + LS L+GRP+V + +K Sbjct: 72 KIKVPRDMDDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLLSYLVGRPVVYKYLSDK 169 HSP 2 Score: 53.5286 bits (127), Expect = 1.161e-23 Identity = 20/37 (54.05%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 614 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIP 724 Q+ + R+ L+NY++FLRITP LPN FIN+ SP++++P Sbjct: 176 QVERHRDHLINYIIFLRITPFLPNWFINITSPVINVP 212
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: TM41_CAEEL (Transmembrane protein 41 homolog OS=Caenorhabditis elegans GN=tag-175 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.251e-21 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 223 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 LK PR + D + L L+ Y ++ + G Y+F+Q+F IPG+IF+++L+G LF ++LV + GA+ C+ +SKL GR V +PE++ +Q ++ Sbjct: 43 LKYPRNLEDAKQLGRVLSKYKENNYSVVLCGVIVVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQKFPERIAKWQDDL 147 HSP 2 Score: 52.7582 bits (125), Expect = 2.251e-21 Identity = 20/36 (55.56%), Postives = 30/36 (83.33%), Query Frame = 2 Query: 617 IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIP 724 ++K R+ LNYM+FLR+TP +PN IN+ASP++D+P Sbjct: 147 LSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVP 182
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: TM41A_MOUSE (Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.947e-21 Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 223 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 L P +A+LR L + L Y +++ + +CS Y++ Q F IPG+ F+++LAGALFG GL+L + GA+ C+ LS L G+ LV ++P+K+ Q +V Sbjct: 42 LWFPSDLAELRELSEVLREYRKEHQAYVFLLFCSAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQLVISYFPDKVALLQKKV 146 HSP 2 Score: 40.817 bits (94), Expect = 4.947e-21 Identity = 16/37 (43.24%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 614 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIP 724 ++ + R L ++LFLR+ P PN F+NL++PI++IP Sbjct: 145 KVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIP 181
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: TM41A_HUMAN (Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.118e-20 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 223 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 L P +A+LR L + L Y +++ + +C Y++ Q F IPG+ F+++LAGALFG GL+L + GA+ C+ LS + G+ LV ++P+K+ Q +V Sbjct: 42 LWFPSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKV 146 HSP 2 Score: 40.817 bits (94), Expect = 3.118e-20 Identity = 16/37 (43.24%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 614 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIP 724 ++ + R L ++LFLR+ P PN F+NL++PI++IP Sbjct: 145 KVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIP 181
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: T41AA_DANRE (Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.549e-19 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 220 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 +LK P + +L+ + + L Y ++ ++ +CS Y++ Q F IPG+ F+++LAGALFG GL+L T GA+ CF LS+ G+ + +P+K+ Q +V Sbjct: 58 RLKFPSDLDELKEMAELLQFYKTEHTGYVLLLFCSAYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTCVLTTVGATLCFLLSQAFGKHHIVKLFPDKVAMLQKKV 163 HSP 2 Score: 39.6614 bits (91), Expect = 2.549e-19 Identity = 16/37 (43.24%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 614 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIP 724 ++ + R L ++LFLR P PN F+N+ SPI++IP Sbjct: 162 KVEENRSSLFFFLLFLRFFPMSPNWFLNMTSPILNIP 198
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: TM41A_BOVIN (Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16 Identity = 40/105 (38.10%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 223 LKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 L P +A+LR L + L Y +++ V + +CS Y++ Q+F IPG+ F+++LAGALFG GL+L + GA+ C+ LS + G+ LV +++P+K+ Q +V Sbjct: 42 LWFPSDLAELRELSEVLREYRKEHQVYVFLLFCSAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQLVVFYFPDKVALLQKKV 146
BLAST of CV712491 vs. ExPASy Swiss-Prot
Match: T41AB_DANRE (Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 220 KLKLPRTIADLRLLKDNLATYAQDYPVPFIIGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLILVVFNATAGASSCFFLSKLIGRPLVSWFWPEKLRFFQAEV 537 +LK P + +LR L + L Y ++ I +CS Y++ Q+F IPG+ F+++L+GALFG + GLI+ T G+++C+ LS+ G+ + +PEK+ Q V Sbjct: 52 RLKFPSDLEELRELAELLKFYKTEHTGYVFILFCSAYLYKQSFAIPGSSFLNMLSGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKRHIVRLFPEKVAMLQRMV 157 The following BLAST results are available for this feature:
BLAST of CV712491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712491 ID=CV712491; Name=CV712491; organism=Citrus sinensis; type=EST; length=728bpback to top |