CV712488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.192e-41 Identity = 76/137 (55.47%), Postives = 105/137 (76.64%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NA SGM V D K F EL+ K+ HR++I+KI+ K G P +++ED AA+LP ++CRYA++DFD+V+SE +S+IFF+AWSP T+R+R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ ++RAN Sbjct: 3 NAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.935e-40 Identity = 75/129 (58.14%), Postives = 97/129 (75.19%), Query Frame = -3 Query: 351 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 737 + D K +F E++ KKVHRYV++K++ K G ESY+D AA+LPE+DCRYAV+DFDYVT +NC+ SKIFFI WSP SRIR KM+YATSK RR LDG+HYE+QATDPTEM +++++RA Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 6.935e-40 Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = -3 Query: 351 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 758 NA SGM V D K F EL+ K+ +R++IF+ID G P E+Y+DF LP N+CRYAVYDFD+ T+EN QKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM L+ +++RA Sbjct: 3 NAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKL--GSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.018e-39 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 N++SG+ V D K F EL+ ++ R+++F+ID + G P + Y DF +LP N+CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L+ +R+R N Sbjct: 3 NSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.231e-38 Identity = 80/130 (61.54%), Postives = 98/130 (75.38%), Query Frame = -3 Query: 348 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 737 V + SK+AF EL R+KVHRYVIFKID KTG P ESY+DF A+LP + AVYD D+V+ +NC+KSKIFFI+WSPS S IRAK +YA +++FR ELDG+H+EIQATDP +MDLE LR RAN Sbjct: 19 VPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.914e-38 Identity = 72/137 (52.55%), Postives = 100/137 (72.99%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 N++SG+ V+D K F +L+ ++ R+++F+ID + G P + Y DF +LP ++CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L+ +++R N Sbjct: 3 NSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.224e-36 Identity = 72/127 (56.69%), Postives = 98/127 (77.17%), Query Frame = -3 Query: 351 DHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 731 D+ K F EL +K++ R++IF+ID G P E+Y+DF A+LP ++CRYAV+DFD+ T+ENCQKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM + +++RA Sbjct: 2 DNCKLKFLEL-KKRIFRFIIFRIDGQQVVVEKL--GNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.036e-35 Identity = 68/136 (50.00%), Postives = 100/136 (73.53%), Query Frame = -3 Query: 351 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 758 NA SG+ V D F ELQ K++HR++ FK+D + G A SY+DF +LPENDCRYA+YDFD+VT+E+ QKS+IF+I WSPS++++++KMLYA+S +F+ L+GI E+QATD +E+ L+E+++RA Sbjct: 3 NARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34 Identity = 64/135 (47.41%), Postives = 97/135 (71.85%), Query Frame = -3 Query: 354 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNR 758 N++SG+ + D K F ELQ K++HR++ F +D K G SYEDF ++LPE DCR+A+YDFD++T+E+ KS+IF+I WSP +++R+KMLYA+S +RF++EL+GI E+QATD E+ L+ L++R Sbjct: 3 NSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.772e-27 Identity = 57/148 (38.51%), Postives = 93/148 (62.84%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSE-----------NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NATSG+ V++ K F EL+ + HR+V+FKID + G +++ A+LP + CRYAVYD D+ S+ +SKIFF++WSP+ + +R+KM+YA+S + F++ELDG+ ++QATDP+E+ L+ L++ + Sbjct: 3 NATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150 The following BLAST results are available for this feature:
BLAST of CV712488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712488 ID=CV712488; Name=CV712488; organism=Citrus sinensis; type=EST; length=850bpback to top |