CV712486

Overview
NameCV712486
Unique NameCV712486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B17_SOLDE (Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum GN=R1B-17 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 78/268 (29.10%), Postives = 121/268 (45.15%), Query Frame = 2
Query:    8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            G + +   L + ++NG   +                   L+++  + +HF   A   V + Y+  ELL  ++ +              K  E +L   LR  L  + Y+++ DDVW    W D+     D     RII+TTRH  VAK A   S P+H   L     +E+WKL  +K             LK++   I   CE LPL+IV V G+LS   + V  W+++ + LG+ + +     D   ++++ YH LP HLKSC LYF
Sbjct:  542 GFKDVIENLRNRLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKELLLALLCDAVGDDSAR-----RKHNENKLADKLRKTLLSRRYLILVDDVWDNSAWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEKRCSSLL--LKDVGLRIAKMCEQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 794          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8L3_ARATH (Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana GN=RPP8L3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23
Identity = 71/233 (30.47%), Postives = 122/233 (52.36%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIH-ELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D ++ HF   AWV V +++ +  + + +++E     G     EI +M+E  +   L   L+   Y+VV DDVWK + W  ++  +   K+  ++++T+R+  V      + P  +      L P E+WKLF R             E++ + ++++  C GLPLA+  +GGLL+ K+   SEWK++ + +G+ I+G     D  L    R+LS  Y DLP  LK C LY
Sbjct:  203 IFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRILQELRPHDG-----EILQMDEYTIQGKLFQLLETGRYLVVLDDVWKEEDWDRIKE-VFPRKRGWKMLLTSRNEGVGL---HADPTCLSFRARILNPKESWKLFER--IVPRRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKH-TASEWKRVSENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTDLKHCFLY 423          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B14_SOLDE (Putative late blight resistance protein homolog R1B-14 OS=Solanum demissum GN=R1B-14 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.088e-22
Identity = 77/268 (28.73%), Postives = 120/268 (44.78%), Query Frame = 2
Query:    8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            G + +   L + ++NG   +                   L+++  + +HF   A   V + Y+  ELL  ++ +              K  E +L   LR  L  + Y+++ DDVW    W D+     D     RII+TTRH  VAK A   S P+H   L     +E+WKL  +K             LK++   I   C  LPL+IV V G+LS   + V  W+++ + LG+ + +     D   ++++ YH LP HLKSC LYF
Sbjct:  542 GFKDVIENLRNRLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKELLLALLCDAVGDDSAR-----RKHNENKLADKLRKTLLSRRYLILVDDVWDNSAWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEKRCSSLL--LKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 794          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A_SOLDE (Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 77/267 (28.84%), Postives = 124/267 (46.44%), Query Frame = 2
Query:   11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            IE++++KL+    NG   +                   L+++  + + F   A   V + Y+  +L+  ++++  +        E+H  E   L   LR  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A   S P+H+   + +   E+WKL  +K             LK +   I   C  LPL+IV V G+LS   + V  W+++ + LGS + +     D   ++ + YH LP HLKSC LYF
Sbjct:  551 IENLRKKLL----NGTKGQDVISIHGMPGLGKTTLANSLYSDRSVFSQFDICAQCCVSQVYSYKDLILALLRD--AIGEGSVRRELHANE---LADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLHLRMFDEV---ESWKLLEKKVFGEESCSPL---LKNVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGSYIHN-----DSRAIVDKSYHVLPCHLKSCFLYF 797          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A6_SOLDE (Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum GN=R1A-6 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 72/229 (31.44%), Postives = 115/229 (50.22%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            L+++  + + F   A   V + Y+  +LL +++++     G+ +  E  ++ + EL   LR  L  + Y+++ DDVW    W D+     D     RII+TTRH  VAK A   S P+H+   + +   E+WKL  +K             LK +   I   C  LPL+IV V G+LS   + V  W+++ + LGS + +     D   ++ + YH LP HLKSC LYF
Sbjct:  567 LYSDRSVVSQFDFCAQCCVSQVYSCKDLLLSLLRDA---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVRSDPLHLRMFDEV---ESWKLLEKKVFGEQSCPPL---LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 779          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A4_SOLDE (Putative late blight resistance protein homolog R1A-4 OS=Solanum demissum GN=R1A-4 PE=5 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 78/269 (29.00%), Postives = 124/269 (46.10%), Query Frame = 2
Query:    8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNR-VLSEGYHDLPHHLKSCLLYF 808
            G + +   L + ++NG   +                   L+++  + +HF   A   V + Y+  +LL  ++ +  +        E+H  E   L   LR  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A   S P+H   L     +E+WKL  +K             LK++   I   C  LPL+IV V G+LS   + V  W+++ + LG+      H++  +R ++ + YH LP HLKSC LYF
Sbjct:  534 GFKDVIENLRNQLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKDLLLALLCD--AIGEGSVRRELHANE---LADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEQSCSPL---LKKVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANDLGT------HIRSNSRAIVDQSYHVLPCHLKSCFLYF 785          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A10_SOLDE (Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum GN=R1A-10 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 72/229 (31.44%), Postives = 115/229 (50.22%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            L+++  + + F   A   V + Y+  +LL +++++     G+ +  E  ++ + EL   LR  L  + Y+++ DDVW    W D+     D     RII+TTRH  VAK A   S P+H+   + +   E+WKL  +K             LK +   I   C  LPL+IV V G+LS   + V  W+++ + LGS + +     D   ++ + YH LP HLKSC LYF
Sbjct:  567 LYSDRSVVSQFDFCAQCCVSQVYSCKDLLLSLLRDA---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVRSDPLHLRMFDEV---ESWKLLEKKVFGEQSCPPL---LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 779          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B12_SOLDE (Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum GN=R1B-12 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 77/267 (28.84%), Postives = 120/267 (44.94%), Query Frame = 2
Query:   11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            IE++++KL+    NG   +                   L+++  + + F   A   V + Y+  ELL  ++ +              ++ + EL    R  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A   S P+H   L     +E+WKL  +K             LK +   I   C  LPL+IV V G+LS   + V  W+++ + LGS + +     D   ++ + YH LP HLKSC LYF
Sbjct:  574 IENLRKKLL----NGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKELLLALLCDAVGEDSAR-----RELPDNELADMFRKTLLPRRYLILVDDVWENSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLH---LRMFGEDESWKLLEKKVFGEERCSPL---LKNVGLRIAKMCGRLPLSIVLVAGILSEMEKEVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPFHLKSCFLYF 820          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B16_SOLDE (Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum GN=R1B-16 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 75/268 (27.99%), Postives = 124/268 (46.27%), Query Frame = 2
Query:    8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            G + +   L + ++NG   +                   L+++  + + F   A   V + Y+  +LL  ++ +     G+ +  +  ++ + EL   LR  L  + Y+++ DDVW    W D+     D     RII+TTRH  VAK A   S P+H   L     +E+WKL  +K             LK++   I   C  LPL+IV V G+LS   + V  W+++ + LG+ + +     D   ++++ YH LP HLKSC LYF
Sbjct:  541 GFKDVIENLRNQLLNGTKGQDAISIHGMPGLGKTTLANTLYSDRSVVSQFDICAQCCVSQVYSYKDLLLALLCDA---VGEDS--DRRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDKDESWKLLEKKVFGEQSCSPL---LKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 792          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B19_SOLDE (Putative late blight resistance protein homolog R1B-19 OS=Solanum demissum GN=R1B-19 PE=5 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 74/268 (27.61%), Postives = 120/268 (44.78%), Query Frame = 2
Query:    8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            G E I   L   ++NG   +                   L+++  + + F   A   V + Y+  +LL +++ +     G+ +  E  ++ + EL   LR  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A     P+H   L     NE+WK   +              L+++ Q I   C  LP +IV V G+ S   + V  W+++ + LG+ + +     D   ++ + YH LP HLKSC LYF
Sbjct:  544 GFEDIIENLRKKLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKDLLLSLLCDT---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDTNNRSRIILTTRHHEVAKYASVHIDPLH---LRMFDENESWKFLEKNVFGEESCSPL---LRDVGQRIAKMCGQLPFSIVLVAGIPSEMEKEVECWEQVANNLGTRIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 795          
The following BLAST results are available for this feature:
BLAST of CV712486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
R1B17_SOLDE3.221e-2329.10Putative late blight resistance protein homolog R1... [more]
RP8L3_ARATH5.495e-2330.47Disease resistance RPP8-like protein 3 OS=Arabidop... [more]
R1B14_SOLDE2.088e-2228.73Putative late blight resistance protein homolog R1... [more]
R1A_SOLDE6.075e-2228.84Late blight resistance protein R1-A OS=Solanum dem... [more]
R1A6_SOLDE6.075e-2231.44Putative late blight resistance protein homolog R1... [more]
R1A4_SOLDE6.075e-2229.00Putative late blight resistance protein homolog R1... [more]
R1A10_SOLDE6.075e-2231.44Putative late blight resistance protein homolog R1... [more]
R1B12_SOLDE2.309e-2128.84Putative late blight resistance protein homolog R1... [more]
R1B16_SOLDE3.015e-2127.99Putative late blight resistance protein homolog R1... [more]
R1B19_SOLDE1.146e-2027.61Putative late blight resistance protein homolog R1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H08_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712486 ID=CV712486; Name=CV712486; organism=Citrus sinensis; type=EST; length=810bp
GTTGTGGGGGATCGAATCCATTAAACGTAAATTGATTGATTTGATGGTGA
ACGGAAGATCCGAACGTTCAGTGGTTGCTGTGGTGGGTGTAGGAGGGCTA
GGCAAGACCACTCTTGCTGGAAAACTTTTTAACAATGATGGTTTAAAAAC
TCACTTCAGTAGCCGGGCTTGGGTCACCGTTGGGAAAGAATACAACAAAA
ATGAATTGTTGAGGACAGTTATAAAGGAGTTTCACAGTTTCTCAGGGCAG
CCTACTCCAGTCGAGATACACAAAATGGAAGAGATGGAGCTGATCACCAC
GCTGAGGGGCCACTTGAAGGACAAGAATTACATGGTTGTGTTCGACGATG
TTTGGAAGATTGATTTTTGGGGAGACGTGGAGCATGCTTTACTTGATAAC
AAGAAATGCGGCAGGATAATTGTCACAACACGGCACATGAATGTCGCTAA
GGCTTGCAAATCATCTTCCCCTGTTCATATCCATGAGCTTGAAACTTTGC
CTCCGAATGAAGCGTGGAAACTTTTTTGTAGAAAGGCTTCCGGACCAAGC
TCCGGAGGCTGTTGTCCTTCAGAGTTGAAGGAGTTGTCCCAGGACATCCT
TGGAAAATGTGAAGGTTTGCCTCTTGCTATCGTGGCCGTAGGTGGACTTC
TTTCAACCAAGAACAGGGTTGTATCTGAATGGAAGAAATTATTTGATCGG
TTGGGCTCAATCTTAGGAAGTGATCCCCATCTAAAAGACTGCAACAGAGT
TTTATCTGAAGGATATCATGATCTTCCTCACCATCTCAAATCATGTCTTC
TGTACTTTGG
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