CV712486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B17_SOLDE (Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum GN=R1B-17 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23 Identity = 78/268 (29.10%), Postives = 121/268 (45.15%), Query Frame = 2 Query: 8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 G + + L + ++NG + L+++ + +HF A V + Y+ ELL ++ + K E +L LR L + Y+++ DDVW W D+ D RII+TTRH VAK A S P+H L +E+WKL +K LK++ I CE LPL+IV V G+LS + V W+++ + LG+ + + D ++++ YH LP HLKSC LYF Sbjct: 542 GFKDVIENLRNRLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKELLLALLCDAVGDDSAR-----RKHNENKLADKLRKTLLSRRYLILVDDVWDNSAWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEKRCSSLL--LKDVGLRIAKMCEQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 794
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8L3_ARATH (Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana GN=RPP8L3 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23 Identity = 71/233 (30.47%), Postives = 122/233 (52.36%), Query Frame = 2 Query: 125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIH-ELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805 +F++D ++ HF AWV V +++ + + + +++E G EI +M+E + L L+ Y+VV DDVWK + W ++ + K+ ++++T+R+ V + P + L P E+WKLF R E++ + ++++ C GLPLA+ +GGLL+ K+ SEWK++ + +G+ I+G D L R+LS Y DLP LK C LY Sbjct: 203 IFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRILQELRPHDG-----EILQMDEYTIQGKLFQLLETGRYLVVLDDVWKEEDWDRIKE-VFPRKRGWKMLLTSRNEGVGL---HADPTCLSFRARILNPKESWKLFER--IVPRRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKH-TASEWKRVSENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTDLKHCFLY 423
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B14_SOLDE (Putative late blight resistance protein homolog R1B-14 OS=Solanum demissum GN=R1B-14 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.088e-22 Identity = 77/268 (28.73%), Postives = 120/268 (44.78%), Query Frame = 2 Query: 8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 G + + L + ++NG + L+++ + +HF A V + Y+ ELL ++ + K E +L LR L + Y+++ DDVW W D+ D RII+TTRH VAK A S P+H L +E+WKL +K LK++ I C LPL+IV V G+LS + V W+++ + LG+ + + D ++++ YH LP HLKSC LYF Sbjct: 542 GFKDVIENLRNRLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKELLLALLCDAVGDDSAR-----RKHNENKLADKLRKTLLSRRYLILVDDVWDNSAWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEKRCSSLL--LKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 794
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A_SOLDE (Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22 Identity = 77/267 (28.84%), Postives = 124/267 (46.44%), Query Frame = 2 Query: 11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 IE++++KL+ NG + L+++ + + F A V + Y+ +L+ ++++ + E+H E L LR L + Y+++ DDVW+ W D+ D RII+TTRH VAK A S P+H+ + + E+WKL +K LK + I C LPL+IV V G+LS + V W+++ + LGS + + D ++ + YH LP HLKSC LYF Sbjct: 551 IENLRKKLL----NGTKGQDVISIHGMPGLGKTTLANSLYSDRSVFSQFDICAQCCVSQVYSYKDLILALLRD--AIGEGSVRRELHANE---LADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLHLRMFDEV---ESWKLLEKKVFGEESCSPL---LKNVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGSYIHN-----DSRAIVDKSYHVLPCHLKSCFLYF 797
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A6_SOLDE (Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum GN=R1A-6 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22 Identity = 72/229 (31.44%), Postives = 115/229 (50.22%), Query Frame = 2 Query: 125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 L+++ + + F A V + Y+ +LL +++++ G+ + E ++ + EL LR L + Y+++ DDVW W D+ D RII+TTRH VAK A S P+H+ + + E+WKL +K LK + I C LPL+IV V G+LS + V W+++ + LGS + + D ++ + YH LP HLKSC LYF Sbjct: 567 LYSDRSVVSQFDFCAQCCVSQVYSCKDLLLSLLRDA---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVRSDPLHLRMFDEV---ESWKLLEKKVFGEQSCPPL---LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 779
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A4_SOLDE (Putative late blight resistance protein homolog R1A-4 OS=Solanum demissum GN=R1A-4 PE=5 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22 Identity = 78/269 (29.00%), Postives = 124/269 (46.10%), Query Frame = 2 Query: 8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNR-VLSEGYHDLPHHLKSCLLYF 808 G + + L + ++NG + L+++ + +HF A V + Y+ +LL ++ + + E+H E L LR L + Y+++ DDVW+ W D+ D RII+TTRH VAK A S P+H L +E+WKL +K LK++ I C LPL+IV V G+LS + V W+++ + LG+ H++ +R ++ + YH LP HLKSC LYF Sbjct: 534 GFKDVIENLRNQLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSHFDICAQCCVSQVYSYKDLLLALLCD--AIGEGSVRRELHANE---LADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDANNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDEDESWKLLEKKVFGEQSCSPL---LKKVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANDLGT------HIRSNSRAIVDQSYHVLPCHLKSCFLYF 785
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1A10_SOLDE (Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum GN=R1A-10 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22 Identity = 72/229 (31.44%), Postives = 115/229 (50.22%), Query Frame = 2 Query: 125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 L+++ + + F A V + Y+ +LL +++++ G+ + E ++ + EL LR L + Y+++ DDVW W D+ D RII+TTRH VAK A S P+H+ + + E+WKL +K LK + I C LPL+IV V G+LS + V W+++ + LGS + + D ++ + YH LP HLKSC LYF Sbjct: 567 LYSDRSVVSQFDFCAQCCVSQVYSCKDLLLSLLRDA---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVRSDPLHLRMFDEV---ESWKLLEKKVFGEQSCPPL---LKNIGLRIAKMCGQLPLSIVLVAGILSEMEKDVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 779
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B12_SOLDE (Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum GN=R1B-12 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21 Identity = 77/267 (28.84%), Postives = 120/267 (44.94%), Query Frame = 2 Query: 11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 IE++++KL+ NG + L+++ + + F A V + Y+ ELL ++ + ++ + EL R L + Y+++ DDVW+ W D+ D RII+TTRH VAK A S P+H L +E+WKL +K LK + I C LPL+IV V G+LS + V W+++ + LGS + + D ++ + YH LP HLKSC LYF Sbjct: 574 IENLRKKLL----NGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKELLLALLCDAVGEDSAR-----RELPDNELADMFRKTLLPRRYLILVDDVWENSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLH---LRMFGEDESWKLLEKKVFGEERCSPL---LKNVGLRIAKMCGRLPLSIVLVAGILSEMEKEVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPFHLKSCFLYF 820
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B16_SOLDE (Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum GN=R1B-16 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21 Identity = 75/268 (27.99%), Postives = 124/268 (46.27%), Query Frame = 2 Query: 8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 G + + L + ++NG + L+++ + + F A V + Y+ +LL ++ + G+ + + ++ + EL LR L + Y+++ DDVW W D+ D RII+TTRH VAK A S P+H L +E+WKL +K LK++ I C LPL+IV V G+LS + V W+++ + LG+ + + D ++++ YH LP HLKSC LYF Sbjct: 541 GFKDVIENLRNQLLNGTKGQDAISIHGMPGLGKTTLANTLYSDRSVVSQFDICAQCCVSQVYSYKDLLLALLCDA---VGEDS--DRRELPDNELADMLRKTLLPRRYLILVDDVWDNSAWDDLRGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLH---LRMFDKDESWKLLEKKVFGEQSCSPL---LKDVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAIVNQSYHVLPCHLKSCFLYF 792
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B19_SOLDE (Putative late blight resistance protein homolog R1B-19 OS=Solanum demissum GN=R1B-19 PE=5 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20 Identity = 74/268 (27.61%), Postives = 120/268 (44.78%), Query Frame = 2 Query: 8 GIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808 G E I L ++NG + L+++ + + F A V + Y+ +LL +++ + G+ + E ++ + EL LR L + Y+++ DDVW+ W D+ D RII+TTRH VAK A P+H L NE+WK + L+++ Q I C LP +IV V G+ S + V W+++ + LG+ + + D ++ + YH LP HLKSC LYF Sbjct: 544 GFEDIIENLRKKLLNGTKGQDVISIHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKDLLLSLLCDT---IGEES--ERRELPDNELADMLRKTLLPRRYLILVDDVWENSVWDDLRGCFPDTNNRSRIILTTRHHEVAKYASVHIDPLH---LRMFDENESWKFLEKNVFGEESCSPL---LRDVGQRIAKMCGQLPFSIVLVAGIPSEMEKEVECWEQVANNLGTRIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 795 The following BLAST results are available for this feature:
BLAST of CV712486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712486 ID=CV712486; Name=CV712486; organism=Citrus sinensis; type=EST; length=810bpback to top |