CV712407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_XYLF2 (NADH-quinone oxidoreductase subunit D OS=Xylella fastidiosa (strain M23) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33 Identity = 93/285 (32.63%), Postives = 140/285 (49.12%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPY-------------------------GWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E + D+ +A +G RM Y+R GGV DLP +D F D F + EY+ L+T N I+ A WG++G MLR SGI WDLRK Y YD D+++ GD RYL R+ EM ES +II+Q ++ + P + + C + + P+R ++ + K S + + E Y+ VEAPKGE G +LI D + P+R +R PGF +L + +V+ LAD++ ++G+ D++ GEVDR Sbjct: 153 EELMDVYEAISGARMHAAYYRPGGVYRDLPDTMPKYKESRWHKGKALKRLNAAREGSMLDFLEHFTDTFPQRIDEYETLLTDNRIWKQRTVGVGVIEPDVAKAWGMTGVMLRGSGIAWDLRKKQPYAKYDAVDFDIPLGTCGDCYDRYLCRVAEMRESNRIIKQCVQWLKMNPGQVMVENC--KVAPPKRESMKDDMEALIHHFKLFSEGYCVPAGETYSAVEAPKGEFGCYLISDGANKPFRVHLRAPGFAHLSSMDAVVRGYMLADVVAMIGTYDLVFGEVDR 435
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_FRATO (NADH-quinone oxidoreductase subunit D OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33 Identity = 92/285 (32.28%), Postives = 138/285 (48.42%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWID---------------------KCLDFCDYFLT----GVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E ++D +A +G RM YFR GGVA DLP LDF D+F+ + E L+T N ++ A G +GPMLR SG+ WDLRK YE Y + ++++ GD RYLVR+ EM ES K+I+Q ++ + P L + + P+RN +N K S + T+ E+Y E PKGE G+++ D + P+R K+R PGF ++ + +L+ LAD I+ +ID++ G+VDR Sbjct: 135 EDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGSVLSDN--HKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR 417
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_FRATH (NADH-quinone oxidoreductase subunit D OS=Francisella tularensis subsp. holarctica (strain LVS) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33 Identity = 92/285 (32.28%), Postives = 138/285 (48.42%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWID---------------------KCLDFCDYFLT----GVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E ++D +A +G RM YFR GGVA DLP LDF D+F+ + E L+T N ++ A G +GPMLR SG+ WDLRK YE Y + ++++ GD RYLVR+ EM ES K+I+Q ++ + P L + + P+RN +N K S + T+ E+Y E PKGE G+++ D + P+R K+R PGF ++ + +L+ LAD I+ +ID++ G+VDR Sbjct: 135 EDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGSVLSDN--HKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR 417
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_FRATF (NADH-quinone oxidoreductase subunit D OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33 Identity = 92/285 (32.28%), Postives = 138/285 (48.42%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWID---------------------KCLDFCDYFLT----GVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E ++D +A +G RM YFR GGVA DLP LDF D+F+ + E L+T N ++ A G +GPMLR SG+ WDLRK YE Y + ++++ GD RYLVR+ EM ES K+I+Q ++ + P L + + P+RN +N K S + T+ E+Y E PKGE G+++ D + P+R K+R PGF ++ + +L+ LAD I+ +ID++ G+VDR Sbjct: 135 EDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGSVLSDN--HKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR 417
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOCD_SULSY (NADH-quinone oxidoreductase subunit C/D OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=nuoC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33 Identity = 84/258 (32.56%), Postives = 137/258 (53.10%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPE--RNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGF-PWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E + D+ + TG R NYFRIGGV ADLPYG +D + +Y+ L+TRN ++L + +GL+G + R SG+ +D+RK+D Y+ Y E ++++ ++GDS RYLVR+ EM +S++II+Q + ++R ++ DP + E + +L E YA + P+GELG ++ + G R +IR F NLQ+ + + +AD +T+L +ID ++GE DR Sbjct: 330 EKIMDIIEGITGARFTINYFRIGGVFADLPYGALDAIEHLIKDLPQRINDYETLLTRNRVWLSRNKDVCVITEEDVYQYGLTGAVARGSGVPYDVRKIDKYDAYGEVEFDIPVGEKGDSYDRYLVRMEEMRQSIRIIEQCI----------AKLRKMSKD-DPYFFQTPDEKKLKVTIDGRGMKLPAGETYASSDNPRGELGFYIYNKKDGLKAHRMRIRSGAFYNLQVFTKAIIGRPIADAITLLSTIDPVVGETDR 576
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_XYLFM (NADH-quinone oxidoreductase subunit D OS=Xylella fastidiosa (strain M12) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 97/285 (34.04%), Postives = 140/285 (49.12%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPY-------------------------GWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGP----YENLEIRCFDRESDPERNDFENRFISKKP-SPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E + D+ +A +G RM Y+R GGV DLP +D F D F + EY+ L+T N I+ A WG++G MLR SGI WDLRK Y YD D+++ GD RYL R+ EM ES +II+Q ++ + P EN ++ RES ++D E K S + + E Y+ VEAPKGE G +LI D + P+R +R PGF +L + +V+ LAD++ ++G+ D++ GEVDR Sbjct: 153 EELMDVYEAISGARMHAAYYRPGGVYRDLPDTMPKYKQSRWHKGKALKRLNAAREGSMLDFLEHFTDTFPQRIDEYETLLTDNRIWKQRTVGVGVIEPDVAKAWGMTGVMLRGSGIAWDLRKKQPYAKYDAVDFDIPLGTCGDCYDRYLCRVAEMRESNRIIKQCVQWLKVNPGQVMVENFKVAPPKRES--MKDDMEALIHHFKLFSEGYCVPAGETYSAVEAPKGEFGCYLISDGANKPFRVHLRAPGFAHLSSMDAVVRGYMLADVVAMIGTYDLVFGEVDR 435
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_XYLFA (NADH-quinone oxidoreductase subunit D OS=Xylella fastidiosa GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 96/285 (33.68%), Postives = 140/285 (49.12%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPY-------------------------GWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGP----YENLEIRCFDRESDPERNDFENRFISKKP-SPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E + D+ +A +G RM Y+R GGV DLP +D F D F + EY+ L+T N I+ A WG++G MLR SG+ WDLRK Y YD D+++ GD RYL R+ EM ES +II+Q ++ + P EN ++ RES ++D E K S + + E Y+ VEAPKGE G +LI D + P+R +R PGF +L + +V+ LAD++ ++G+ D++ GEVDR Sbjct: 153 EELMDVYEAISGARMHAAYYRPGGVYRDLPDTMPKYKQSRWHKGKALKRLNAAREGSMLDFLEHFADTFPQRIDEYETLLTDNRIWKQRTVGVGVIEPDVAKAWGMTGVMLRGSGVAWDLRKKQPYAKYDAVDFDIPLGTCGDCYDRYLCRVAEMRESNRIIKQCVQWLKVNPGQVMVENFKVAPPKRES--MKDDMEALIHHFKLFSEGYCVPAGETYSAVEAPKGEFGCYLISDGANKPFRVHLRAPGFAHLSSMDAVVRGYMLADVVAMIGTYDLVFGEVDR 435
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_NITEC (NADH-quinone oxidoreductase subunit D OS=Nitrosomonas eutropha (strain C91) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 96/284 (33.80%), Postives = 140/284 (49.30%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGW-------------------------IDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGP----YENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E + D +A +G R+ Y+R GGV DLP +D DF F V +Y+ L+T N I+ A G SGPMLR SG+ WDLRK YE YD+ D+++ GD RYLVRI EM +S II+Q ++ + P N ++ R S ++N E K + + + E+YA VE PKGE GI++I D + P+R KIR PGF +L + ++ + +AD++ I+G+ DI+ GE+DR Sbjct: 135 EDLMDCYEAVSGARLHAAYYRPGGVYRDLPDSMPQYRSSAIHDEKTTTARNENRQGSLLDFIEDFTHRFPGYVDDYETLLTDNRIWKQRLVDIGVVSPDRAKALGFSGPMLRGSGVAWDLRKKQPYEVYDQVDFDIPVGVNGDCYDRYLVRIEEMRQSNYIIKQCIDWMRKNPGPVITSNFKVAPPPRLS-MKQNMEEMIHHFKLFTEGMHVPRGEVYAAVEHPKGEFGIYIISDGANMPYRLKIRAPGFAHLAAMDEMARGHMIADLVAIIGTQDIVFGEIDR 417
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_FRATW (NADH-quinone oxidoreductase subunit D OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 92/285 (32.28%), Postives = 138/285 (48.42%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWID---------------------KCLDFCDYFLT----GVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E ++D +A +G RM YFR GGVA DLP LDF D+F+ + E L+T N ++ A G +GPMLR SG+ WDLRK YE Y + ++++ GD RYLVR+ EM ES K+I+Q ++ + P L + + P+RN +N K S + T+ E+Y E PKGE G+++ D + P+R K+R PGF ++ + +L+ LAD I+ +ID++ G+VDR Sbjct: 135 EDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGPVLSDN--HKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR 417
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NUOD_FRATM (NADH-quinone oxidoreductase subunit D OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=nuoD PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 92/285 (32.28%), Postives = 138/285 (48.42%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWID---------------------KCLDFCDYFLT----GVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFIS-----KKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 E ++D +A +G RM YFR GGVA DLP LDF D+F+ + E L+T N ++ A G +GPMLR SG+ WDLRK YE Y + ++++ GD RYLVR+ EM ES K+I+Q ++ + P L + + P+RN +N K S + T+ E+Y E PKGE G+++ D + P+R K+R PGF ++ + +L+ LAD I+ +ID++ G+VDR Sbjct: 135 EDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGPVLSDN--HKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR 417 The following BLAST results are available for this feature:
BLAST of CV712407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712407 ID=CV712407; Name=CV712407; organism=Citrus sinensis; type=EST; length=794bpback to top |