CV712406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RR15_CHAGL (30S ribosomal protein S15, chloroplastic OS=Chaetosphaeridium globosum GN=rps15 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 521 QEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESK 751 + K GS+E QV T ++ +++HL++++KDYSSQRGLRKIL KR+RLL YL KK+ ++YK +I L IR K Sbjct: 9 ESKNINKIGSIEEQVVSLTQRVKFISNHLKINKKDYSSQRGLRKILGKRKRLLTYLYKKDFLKYKFVIQSLGIRSLK 85
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFSM R+HMYPRLKI Sbjct: 1876 LWPNYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRLKI 1914
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RR15_ANEMR (30S ribosomal protein S15, plastid OS=Aneura mirabilis GN=rps15 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 536 KNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 757 K GSVE Q+ TN I +LT H + HRKDYSSQRGL KIL +R+RLL YL + + + Y++L ++L IR+ K + Sbjct: 16 KKDGSVESQICCLTNRIVKLTRHFQTHRKDYSSQRGLWKILGRRKRLLIYLLQTDAIGYRDLTTQLKIRKLKKK 89
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1848 LWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1886
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_SOLBU (Putative membrane protein ycf1 OS=Solanum bulbocastanum GN=ycf1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1848 LWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1886
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1853 LWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1891
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_CUCSA (Putative membrane protein ycf1 OS=Cucumis sativus GN=ycf1-A PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL CMNRYWF+TNN SRFSM+R+HMYP+LKIR Sbjct: 1840 LWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1879
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_SOLLC (Putative membrane protein ycf1 OS=Solanum lycopersicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13 Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 3 Query: 6 WANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1853 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1890
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_JASNU (Putative membrane protein ycf1 OS=Jasminum nudiflorum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL CMNRYWF+TNNGSRFSM+R+ +YPRLKIR Sbjct: 1894 LWPNYRLEDLACMNRYWFDTNNGSRFSMLRIRLYPRLKIR 1933
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFS++R+HMYP+LKI Sbjct: 1862 LWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPQLKI 1900 The following BLAST results are available for this feature:
BLAST of CV712406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712406 ID=CV712406; Name=CV712406; organism=Citrus sinensis; type=EST; length=819bpback to top |