CV712406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_FUSNN (30S ribosomal protein S15 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsO PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 527 KKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 K E ++GS E Q+ T I LT HL +H+KD+ S+ GL K++ +R+RLLAYL+KK+ Y+ LI+KL IR+ Sbjct: 13 KSEADTGSTEVQIALLTEKINHLTEHLRVHKKDFHSRLGLLKMVGQRKRLLAYLTKKDLEGYRALIAKLGIRK 85
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_POPAL (Putative membrane protein ycf1 OS=Populus alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL C+NRYWF+TNN SRFSM+R+H+ PRLKIR Sbjct: 1781 LWPNYRLEDLACINRYWFDTNNASRFSMIRIHICPRLKIR 1820
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_IPOPU (Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL CMNRYWF+TNNGSRFS++R+HMY LKIR Sbjct: 2018 LWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYLPLKIR 2057
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_RUBXD (30S ribosomal protein S15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rpsO PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 491 VKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 V+N ++R E ++GS E QV T I LT HL H+ DY S+RGL K++ KR+RLL YL KK+ RY+ LIS+L +R Sbjct: 4 VENKEETIREFRTHEGDTGSPEVQVAILTRRIAHLTEHLREHKHDYHSRRGLLKMVGKRRRLLKYLQKKDVERYRTLISRLGLR 87
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RR15_CHLAT (30S ribosomal protein S15, chloroplastic OS=Chlorokybus atmophyticus GN=rps15 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 539 NSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 ++GS + QV T + +L+ HL+ H KDY+SQRGLRKIL R++LL YLS K+ V Y+ LISKL IR Sbjct: 16 DTGSTQVQVALLTAKVIQLSQHLKNHNKDYASQRGLRKILGSRKQLLKYLSHKDPVSYQGLISKLGIR 83
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W RLEDL C+NRYWFNT+NGSRFS+VR+H+YPR+KI Sbjct: 1720 LWPKYRLEDLACINRYWFNTHNGSRFSIVRIHLYPRVKI 1758
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_CERDE (Putative membrane protein ycf1 OS=Ceratophyllum demersum GN=ycf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPR 110 +W N RLEDL C+NRYWF+TNNGSRFSM+R+HMYPR Sbjct: 1860 LWPNFRLEDLACINRYWFDTNNGSRFSMLRIHMYPR 1895
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_ACOCL (Putative membrane protein ycf1 OS=Acorus calamus GN=ycf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+T NGSRFSM+R+HMYPR I Sbjct: 1872 LWPNYRLEDLACMNRYWFDTTNGSRFSMLRIHMYPRFLI 1910
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_ACOAM (Putative membrane protein ycf1 OS=Acorus americanus GN=ycf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+T NGSRFSM+R+HMYPR I Sbjct: 1872 LWPNYRLEDLACMNRYWFDTTNGSRFSMLRIHMYPRFLI 1910
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_DICTD (30S ribosomal protein S15 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rpsO PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 E +SGS E Q+ T I++LT HL++H+KDY S+ GL K++ +R++LL YL +K+ RYK+LI +L +R+ Sbjct: 19 ENDSGSPEVQIALLTERIKKLTEHLKVHKKDYHSRVGLLKMIGRRRKLLKYLQEKDFERYKKLIQELGLRK 89 The following BLAST results are available for this feature:
BLAST of CV712406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712406 ID=CV712406; Name=CV712406; organism=Citrus sinensis; type=EST; length=819bpback to top |