CV712406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_BACST (30S ribosomal protein S15 OS=Bacillus stearothermophilus GN=rpsO PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 E ++GS E Q+ T I L HL +H+KD+ S+RGL K++ KR+RLLAYL K+ RY+E++ KL +R Sbjct: 19 ENDTGSPEVQIAILTEQINNLNEHLRVHKKDHHSRRGLLKMVGKRRRLLAYLRNKDVARYREIVEKLGLR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_PELHO (Putative membrane protein ycf1 OS=Pelargonium hortorum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12 Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL CMNRYWF+T NGSRFSM+R+ +YPRLK R Sbjct: 2513 LWPNYRLEDLACMNRYWFDTTNGSRFSMLRIRVYPRLKTR 2552
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_ARAHI (Putative membrane protein ycf1 OS=Arabis hirsuta GN=ycf1-A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12 Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 122 +W N RLEDL CMNRYWFNT NG+ FSM+R+HMY R +IR Sbjct: 1739 LWPNFRLEDLACMNRYWFNTTNGNHFSMIRIHMYARFQIR 1778
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_FINM2 (30S ribosomal protein S15 OS=Finegoldia magna (strain ATCC 29328) GN=rpsO PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 512 VRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 ++ + KE ++GS E QV T I LT HL+ H+ D+ S+RGL K++ KR+ LL YLS K+ RY++LI +LNIR Sbjct: 11 IKEYQTKEGDTGSPEVQVALLTYRINYLTEHLKSHKNDHHSRRGLFKMIGKRRNLLNYLSNKDIERYRDLIKRLNIR 87
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_ILLOL (Putative membrane protein ycf1 OS=Illicium oligandrum GN=ycf1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 IW N RLEDL CMNRYWF+TNNGS FSM R++MYPR +I Sbjct: 1843 IWPNYRLEDLACMNRYWFDTNNGSHFSMSRIYMYPRFRI 1881
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_GEOTN (30S ribosomal protein S15 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsO PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 E ++GS E Q+ T I L HL +H+KD+ S+RGL K++ KR+ LLAYL K+ RY+ELI KL +R Sbjct: 19 ENDTGSPEVQIAILTEQINNLNEHLRVHKKDHHSRRGLLKMVGKRRNLLAYLRNKDVARYRELIEKLGLR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_BUCAP (30S ribosomal protein S15 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsO PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 527 KKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 K EKN+G + Q+ TN I L H H+KD+ S+RGL K++ KR++LL YL KKN Y +LI LN+R Sbjct: 17 KNEKNTGKTDVQIALLTNQINHLQLHFSQHKKDHCSRRGLLKMVSKRRKLLNYLKKKNISCYTKLIESLNLR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_ACAM1 (30S ribosomal protein S15 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsO PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 32/77 (41.56%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 512 VRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 + + E ++GS + QV T I +L+ HL+ ++KD+SS+RGL K++ +R+RLL Y+ KK++ Y+ELI +L IR Sbjct: 12 INAYQVHETDTGSADVQVAMLTERISKLSEHLKTNKKDHSSRRGLLKMIGQRKRLLTYIMKKDQAHYRELIKRLGIR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 3 IWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 119 +W N RLEDL CMNRYWF+TNNGSRFSM R++MYP+ +I Sbjct: 1818 LWPNYRLEDLACMNRYWFDTNNGSRFSMSRIYMYPQFRI 1856
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_THEM4 (30S ribosomal protein S15 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rpsO PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 E ++GS E QV T I+ LT HL+ H KDY S+RGL K++ +R+++L YL KN YKE+I KL +R+ Sbjct: 14 EGDTGSAEVQVALLTARIKHLTEHLKKHPKDYHSRRGLMKLVGRRRKILKYLRNKNPEAYKEVIQKLGLRK 84 The following BLAST results are available for this feature:
BLAST of CV712406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712406 ID=CV712406; Name=CV712406; organism=Citrus sinensis; type=EST; length=819bpback to top |