CV712406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_THEP1 (30S ribosomal protein S15 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 E ++GSVE Q+ T I+ LT HL H KD+ S+RGL K++ +R+++L YL K Y+ELI+KL IR+ Sbjct: 20 ENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYLRHKKPEVYRELIAKLGIRK 90
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_THEMA (30S ribosomal protein S15 OS=Thermotoga maritima GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 E ++GSVE Q+ T I+ LT HL H KD+ S+RGL K++ +R+++L YL K Y+ELI+KL IR+ Sbjct: 20 ENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYLRHKKPEVYRELIAKLGIRK 90
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_SYMTH (30S ribosomal protein S15 OS=Symbiobacterium thermophilum GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 E ++GS E Q+ T+ I LT HL +H+KD+ S+RGL K++ +R+ LL YL+K + RY +LI +LNIR Sbjct: 19 ETDTGSPEVQIALLTHRINELTEHLRVHKKDHHSRRGLLKMVGQRRALLVYLNKISPERYAKLIDRLNIR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_PETMO (30S ribosomal protein S15 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 +K++GSVE QV + I+ LT HL+ H KDY S+RGL ++ KR+++L YL K + Y+E+I+KL IR Sbjct: 21 DKDTGSVEVQVALLSARIKHLTEHLKQHPKDYHSRRGLMMMVGKRRKMLKYLRKSKPLVYQEIINKLGIR 90
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_OCEIH (30S ribosomal protein S15 OS=Oceanobacillus iheyensis GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 E ++GS E Q+ T I L HL +H+KD+ S+RGL K++ KR+ LL YL K+ RY+ELI KL +R Sbjct: 19 ETDTGSPEVQIAVLTEEITSLNEHLRVHKKDHHSRRGLLKMVGKRRNLLTYLRNKDVTRYRELIKKLGLR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_LACPL (30S ribosomal protein S15 OS=Lactobacillus plantarum GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 527 KKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 + E ++GSVE QV T I L HL +H+KD+ SQRGL K + R+ LLAYL K++ RY++LI L +R Sbjct: 17 RHEGDTGSVEVQVAVLTEDINELNEHLRVHKKDFHSQRGLMKKIGHRRNLLAYLRKEDVNRYRDLIQSLGLR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_CYAP4 (30S ribosomal protein S15 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 32/70 (45.71%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 533 EKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 742 E ++GS + QV T I +L++HL+ + KD+SS+RGL +++ +R+RLLAY+ K N RY+ LI++L IR Sbjct: 19 ETDTGSADVQVAMLTERINKLSTHLQANSKDHSSRRGLLQMIGRRKRLLAYILKHNPERYRALITRLGIR 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_BORBZ (30S ribosomal protein S15 OS=Borrelia burgdorferi (strain ZS7) GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 527 KKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 K E ++GSV Q+ T I+ LT HL++++KD+SS+RGL K++ +R+ LL Y KK+ Y+ LISKL +R+ Sbjct: 16 KNESDTGSVGVQIALITGRIKYLTEHLKINKKDHSSKRGLLKLVGQRRSLLRYYQKKDLEAYRMLISKLGLRK 88
BLAST of CV712406 vs. ExPASy Swiss-Prot
Match: RS15_BORBU (30S ribosomal protein S15 OS=Borrelia burgdorferi GN=rpsO PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 527 KKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRE 745 K E ++GSV Q+ T I+ LT HL++++KD+SS+RGL K++ +R+ LL Y KK+ Y+ LISKL +R+ Sbjct: 16 KNESDTGSVGVQIALITGRIKYLTEHLKINKKDHSSKRGLLKLVGQRRSLLRYYQKKDLEAYRMLISKLGLRK 88 The following BLAST results are available for this feature:
BLAST of CV712406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712406 ID=CV712406; Name=CV712406; organism=Citrus sinensis; type=EST; length=819bpback to top |