CV712395

Overview
NameCV712395
Unique NameCV712395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: PDI_ASPOR (Protein disulfide-isomerase OS=Aspergillus oryzae GN=pdiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.045e-16
Identity = 66/232 (28.45%), Postives = 104/232 (44.83%), Query Frame = 3
Query:  165 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVS-----------ILNSDAEVSDFVENAGTFFPLFIGFGLDESVMSNLALKYKKKAWFAVAKDFSEDTMVLY-DFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 818
            V+ L    F++ +   D +L +F+APWCGHCK LAP+ ++AA  L +   P+V  KVD  +   L   Q ++ +PTLKIF  G+     Y G R+ E +V Y+ K   P VS            ++    +     +  T   +F  F   ES   N        A  A A+   + ++VLY DFD+  A             + G  +++ L  ++K    PL   +  +T
Sbjct:   31 VVSLTGDTFETFVKEHDLVLAEFFAPWCGHCKALAPKYEQAATELKEKNIPLV--KVDCTEEEALCRDQGVEGYPTLKIF-RGLDAVKPYQGARQTEAIVSYMVKQSLPAVSPVTPENLEEIKTMDKIVVIGYIASDDQTANDIFTTFA--ESQRDNYLFAATSDASIAKAEGVKQPSIVLYKDFDEKKA------------TYDGEIEQDALLSWVKTASTPLVGELGPET 245          

HSP 2 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 3
Query:  219 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDVSILNSD 509
            +L++FYAPWCGHCK LAP+ +E A +   + E + IAK+DA           I  FPT+K+F  G    P EY G R  E L  ++K+     V  L  D
Sbjct:  384 VLLEFYAPWCGHCKALAPKYEELASLYKDIPE-VTIAKIDATAND---VPDSITGFPTIKLFAAGAKDSPVEYEGSRTVEDLANFVKENGKHKVDALEVD 479          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: TMX3_XENLA (Protein disulfide-isomerase TMX3 OS=Xenopus laevis GN=tmx3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  213 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDESVMSNLALKYKKKAWFAVAKDFSEDTMVLY-DFDKVPALVALQPS 713
            D  LVDFYAPWCGHCK+L P  +E    +     PI + K+DA  YS +AS+  +  FPT+K     +   Y GPR  E +V +  +   P +  L S  ++ D V+       LF+  G++ ++         +   +      SED +  Y   ++VPA++  + S
Sbjct:   42 DIWLVDFYAPWCGHCKKLEPVWNEVGIEIRTSGSPIRVGKIDATVYSSIASEFGVRGFPTIKALKGDMAYNYRGPRTKEDIVEFANRVAGPLIRPLPSQ-QMFDHVKKRHPV--LFVYVGVESTLKEKFIEVASELIVYTYFFSASEDVLPKYVTLNEVPAVLVFKDS 206          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: PDI2_SCHPO (Protein disulfide-isomerase C17H9.14c OS=Schizosaccharomyces pombe GN=SPAC17H9.14c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15
Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  135 EETKFKIDGKVIELDESNFDSAISSFDY-ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFM---HGIPTEYYGPRKAELLVRYLKKFV----APDVSILNSDAEVSDFVENAGTFFPL 557
            ++ K  +   V+ELD  NFD  +      +LV+FYA WCG+CKRLAP  +    +  K +  + I K++AD ++ +    E+ +FPT+K F       P  Y G R  E L+ Y+ K      +PD ++L++   +  F E A  F  +
Sbjct:  132 KKRKIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVF-KNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSGTQRSPDGTLLSTAGRIPTFDEFAAEFLDM 279          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15
Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 3
Query:  165 VIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF--MHGIPTEYYGPRKAELLVRYL---------KKFVAPDVSILNSDAEV 518
            V++L  SNFD  +  S    LV+F+APWCGHCK LAP  +E A  L   K+ + IAKVDAD    L  +  +  FPTLK F      P +Y G R  + L  ++         KK  AP +  + +DA +
Sbjct:   22 VLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKKGSAPSLVNILNDATI 151          

HSP 2 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 3
Query:  174 LDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKK 473
            L+++    AI     +LV F APWCGHCK LAP  ++ A   A   E I IAKVDAD  +  + A++  +  FPT+K F  G   P +Y G R    LV++L +
Sbjct:  146 LNDATIKGAIGGDKNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPE-ITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDYNGGRSEADLVKFLNE 248          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: Y5025_DICDI (Putative protein disulfide-isomerase DDB_G0275025 OS=Dictyostelium discoideum GN=DDB_G0275025 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.962e-15
Identity = 59/232 (25.43%), Postives = 101/232 (43.53%), Query Frame = 3
Query:  156 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF-------MHGIPTEYYGPRKAELLVRY-LKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 824
            +  VI L + NF   + +S    +V+FYAPWCGHCK L P+ ++   +   LK  + I  ++ D+   L  + +I  FPTLK F         G P +Y G R A  + ++ L K  +  +  ++ D         +     LF        +   L++ + K      A++ +++T+  ++ DK P L+      N+    +  FD +     I +   P S   N D  N
Sbjct:   26 NSNVINLTKKNFQQQVLNSQQNWMVEFYAPWCGHCKSLKPEYEK---VSNNLKGLVKIGAINCDEEKELCGQYQIQGFPTLKFFSTNPKTGKKGQPEDYQGARSASEIAKFSLAKLPSNHIQKVSQDNINKFLTGTSDAKALLFTDKPKTTDLYKALSVDFFKTLTLGEARNLNKETLEKFNIDKFPTLLVFT---NDDGETFTKFDGKLTHSTIYKFLEPFSKKSNNDNNN 251          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: PDIA6_CAEEL (Probable protein disulfide-isomerase A6 OS=Caenorhabditis elegans GN=tag-320 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.699e-14
Identity = 66/229 (28.82%), Postives = 111/229 (48.47%), Query Frame = 3
Query:  162 KVIELDESNF-DSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT----EYYGPRKAELLV-----RYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD---------ESVMSNLALKYKKKAW-----FAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIK 776
            +V+EL ++NF D  ++S D  LV+F+APWCGHCK L PQ   AA   ++LK  + +  +DA  ++ +A+K  I  FPT+K F  G       +Y G R++  +V     R  +   AP+V    +   V D  +        F+   LD          +++   + K+KK  W        A+   E++  +  F   PA+ AL    N++ +  G F ++ + EF++
Sbjct:  165 EVVELTDANFEDLVLNSKDIWLVEFFAPWCGHCKSLEPQWKAAA---SELKGKVRLGALDATVHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASARAQENMPAPEVFEGINQQVVEDACKEKQLCIFAFLPHILDCQSECRNNYLAMLKEQSEKFKKNLWGWIWVEGAAQPALEESFEVGGFG-YPAMTALNFRKNKYAVLKGSFGKDGIHEFLR 389          

HSP 2 Score: 75.485 bits (184), Expect = 4.186e-13
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  165 VIELDESNFDS-AISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF--MHGIPTEYYGPRKAELL 455
            V+EL E+NF S  I+S D  +V+FYAPWCGHCK L P+  +AA   + LK    +  VD  ++  +     +  FPTLKIF      PT+Y G R A+ +
Sbjct:   26 VVELTEANFQSKVINSDDIWIVEFYAPWCGHCKSLVPEYKKAA---SALKGVAKVGAVDMTQHQSVGGPYNVQGFPTLKIFGADKKKPTDYNGQRTAQAI 122          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14
Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  159 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIG 566
            G V +L+ES  D+     D  LVDFYAPWCGHCK+L P  +E    +  +  P+ + K+DA  YS +AS+  +  +PT+K+    +   Y GPR  + ++ +  +     +  L S  ++ D V      F ++IG
Sbjct:   29 GFVEDLNESFKDNRKD--DIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQ-QMFDHVRKRHRVFFVYIG 161          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: TMX3_HUMAN (Protein disulfide-isomerase TMX3 OS=Homo sapiens GN=TMX3 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3
Query:  159 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRY 464
            G V +LDES  ++   + D  LVDFYAPWCGHCK+L P  +E    +  +  P+ + K+DA  YS +AS+  +  +PT+K+    +   Y GPR  + ++ +
Sbjct:   26 GFVEDLDESFKENR--NDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEF 125          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 3
Query:  153 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF--MHGIPTEYYGPRKAELLVRYLKK 473
            +   V++L   NFD  +  S    LV+F+APWCGHCK LAP  +E     A   + + + KVDAD++  L  K  +  FPTLK F      P +Y G R  E L  ++ +
Sbjct:   17 VTAAVVDLVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFISE 126          

HSP 2 Score: 68.1662 bits (165), Expect = 6.682e-11
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 3
Query:  150 KIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQE--IDAFPTLKIFMHGI--PTEYYGPRKAELLVRYLKK 473
            K   KV  L+++ F  A+   + +LV F APWCGHCK LAP  +  A     L+  +VIAKVDAD  +  A+ +E  +  +PT+K F  G      Y G R  +  + +L +
Sbjct:  137 KEPSKVEMLNDATFKGAVGGDNDVLVAFTAPWCGHCKNLAPTWEALANDFV-LEPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEGARSEQAFIDFLNE 247          
BLAST of CV712395 vs. ExPASy Swiss-Prot
Match: ERP44_MOUSE (Endoplasmic reticulum resident protein ERp44 OS=Mus musculus GN=Erp44 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  153 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL---KEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSD 524
            I  ++  LD  N D  +++ D  LV+FYA WC   + L P  +EA+ ++ +    K  +V A+VD D++S +A +  I  +PTLK+F +G  +  EY G R  + L  Y+++  +  V  + S  EV++
Sbjct:   27 ITAEIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPVHEIQSLDEVTN 155          
The following BLAST results are available for this feature:
BLAST of CV712395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PDI_ASPOR4.045e-1628.45Protein disulfide-isomerase OS=Aspergillus oryzae ... [more]
TMX3_XENLA2.007e-1530.95Protein disulfide-isomerase TMX3 OS=Xenopus laevis... [more]
PDI2_SCHPO4.472e-1532.21Protein disulfide-isomerase C17H9.14c OS=Schizosac... [more]
ERP38_NEUCR7.628e-1538.46Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
Y5025_DICDI9.962e-1525.43Putative protein disulfide-isomerase DDB_G0275025 ... [more]
PDIA6_CAEEL1.699e-1428.82Probable protein disulfide-isomerase A6 OS=Caenorh... [more]
TMX3_MOUSE2.219e-1433.09Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]
TMX3_HUMAN6.457e-1437.25Protein disulfide-isomerase TMX3 OS=Homo sapiens G... [more]
TIGA_ASPNG8.434e-1437.27Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
ERP44_MOUSE1.101e-1332.56Endoplasmic reticulum resident protein ERp44 OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001F06_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712395 ID=CV712395; Name=CV712395; organism=Citrus sinensis; type=EST; length=844bp
AAACTTGAAAACAAATCACATCGAAATTGAAGATGCGAGGGATGAGTAAA
GGTAGAATATGGATCTTATTGTGTCTGTTGTTATTGACAGGAAGAGGTAT
GATGTTATTGACAGGAAGAGGCTTGTCTTCGGAAGAAGAAACAAAATTCA
AAATTGACGGGAAAGTAATAGAACTTGACGAATCCAACTTCGATTCTGCA
ATCTCGTCTTTTGATTACATTTTAGTCGATTTTTACGCTCCTTGGTGCGG
CCACTGCAAGCGCCTCGCTCCTCAGTTAGACGAAGCTGCTCCGATACTTG
CTAAATTGAAAGAGCCAATTGTAATAGCAAAAGTAGACGCTGACAAGTAC
AGCCGTCTTGCTAGTAAGCAAGAGATTGATGCATTTCCTACATTGAAGAT
ATTTATGCATGGGATTCCTACGGAATATTATGGACCTAGAAAAGCAGAAT
TGCTTGTCCGTTATCTTAAGAAATTTGTTGCCCCTGATGTCTCCATTCTT
AATTCAGATGCGGAAGTTTCTGACTTTGTTGAAAATGCTGGTACTTTCTT
TCCCCTATTTATTGGTTTCGGGTTGGATGAATCAGTCATGTCAAACTTAG
CTTTGAAGTATAAGAAAAAGGCCTGGTTTGCTGTCGCTAAGGATTTCTCT
GAGGACACCATGGTGTTGTATGATTTTGACAAAGTTCCGGCTTTGGTTGC
TCTTCAGCCGAGTTACAATGAGCACAACATTTTTTATGGCCCCTTTGATG
AGGAGTTTTTGGAGGAGTTTATAAAACAAAATTTCCTTCCTCTGTCTGTG
CCTATTAACCAAGACACACTGAATCTTTTGAAAGATGATAAAAG
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