CV712348

Overview
NameCV712348
Unique NameCV712348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 59/226 (26.11%), Postives = 117/226 (51.77%), Query Frame = -3
Query:  213 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP-GTIRRAHAVH----PITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLH--------FLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSL-RIKLTKEDLKEISDAV 845
            G+  Y+ +  + SLKR+ ++Y+D++Y HRVD + P+EET   +   V+ GK  Y+G+S  SP  T +    +H    P+   Q  ++L  R +++  ++   +  G+G + ++PL +G   GK  +  +P DS +H          P+   E    N +    +  +A++   + AQ+AL+W+L        + G ++ + L++N+ +L  +  + E+L +I   +
Sbjct:  111 GSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPEDSRMHREGNKVRGLTPKMLTE---ANLNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQALNNLTFSTEELAQIDQHI 332          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: YEZB_SCHPO (Uncharacterized oxidoreductase C3A11.11c OS=Schizosaccharomyces pombe GN=SPAC3A11.11c PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 69/222 (31.08%), Postives = 110/222 (49.55%), Query Frame = -3
Query:  225 RSCCEASLKRL-----DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLGRGFFGGK----AVVENV----------PADSFLHFLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQG-DDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEI 827
            R C   S+K +      V  IDLY    +D   PIEET+  +K+ V+ G I+ IGL E S   I+RAH+V  I A+++ +S+  R+IE   +  LC +L I +V +SPL  G   G+    A +EN+          P+ +F   LP  +             ++ LA KY+ + A+LAL+++L  G   ++PIP  T    ++ ++ S    L      E+
Sbjct:   97 RECITKSIKTVRETLKKVKTIDLYQCAAIDPDTPIEETMACLKEFVDSGDIRCIGLCEPSVEEIKRAHSVVRIAAIEVHYSMLFREIEYNGVKKLCHDLSIPLVAHSPLAHGLLTGRVTTMADIENLKKHHQCNEQPPSSTFSSTLPCIQA------------LKELASKYDMSLAELALSFILSAGRGRILPIPSATSYDLIEASLGSFSKVLDTYQFAEV 306          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: PLR1_YEAST (Putative pyridoxal reductase OS=Saccharomyces cerevisiae GN=YPR127W PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 70/222 (31.53%), Postives = 109/222 (49.10%), Query Frame = -3
Query:  186 YIDLYYQHRVDTSVPIE------ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP--ITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLHFLPRFKGENLDRNKS-IYFRIENLAKK----YNCTSAQLALAWVLG-------QGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVAGNR 785
            YID++   R+DTS+  +      E+   + +++ EG I  I LSE +   IR  H      +T V++E SL++ DI    I   C ELG+ I+ YSPLGRG   G+     ++P   F   L RF  E+L +N + + F  E +  K     + T AQLAL WV          G   +PIP  + +  +++N D  + KLT ++   I+  +      G+R
Sbjct:  120 YIDIFEVARIDTSLCTKGEVYPYESFEALAEMISEGVIGGISLSEVNEEQIRAIHKDWGKFLTCVEVELSLFSNDILHNGIAKTCAELGLSIICYSPLGRGLLTGQLKSNADIPEGDFRKSLKRFSDESLKKNLTLVRFLQEEIVDKRPQNNSITLAQLALGWVKHWNKVPEYSGAKFIPIPSGSSISKVNENFDEQKTKLTDQEFNAINKYLTTFHTVGDR 341          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 59/211 (27.96%), Postives = 106/211 (50.24%), Query Frame = -3
Query:  204 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA------HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLHFLPRFKG--ENLDRNKSIYFRIENLAKKYNCTS-AQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISDAVPIE 809
            SL++L  D+ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      +   P +  Q +W++  RD E +IIP+ R  G+ + P+  +G G F  K  +E    +     +  F G  E  D    I   +  +A+++   S   +A+A+V  +  +  P     K+++L +NI +L I LT +++K +   VP +
Sbjct:  133 SLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAMEERRKNG--EGIRSFVGASEQTDAEIKISEALAKIAEEHGTESVTAIAIAYVRSKAKNFFPSVEGGKIEDLKENIKALSIDLTPDNIKYLESIVPFD 341          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 56/226 (24.78%), Postives = 116/226 (51.33%), Query Frame = -3
Query:  213 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLH--------FLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSL-RIKLTKEDLKEISDAV 845
            G+  Y+ +  + SLKR+ ++Y+D++Y HRVD + P+EET   +   V+ GK  Y+G+S  SP   ++   +      P+   Q  ++L  R +++  ++   +  G+G + ++PL +G   GK  +  +P DS +H          P+   E    N +    +  +A++   + AQ+AL+W+L        + G ++ + L++N+ +L  +  + ++L +I   +
Sbjct:  111 GSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDSRMHREGNKVRGLTPKMLTE---ANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHI 332          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 63/210 (30.00%), Postives = 107/210 (50.95%), Query Frame = -3
Query:  216 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLHFLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISDA 839
            P  +++   AS +RL ++ I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D  E+++P        ++ YSPL +G  GGK  +EN P        P F  ENL R + +   +  +A   +   AQ+ALAW++     VV IPG + ++ L+ N+ +  I+L+ +    ++DA
Sbjct:   92 PAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENRPG-GVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNVAAADIELSAQSRDALTDA 299          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 63/210 (30.00%), Postives = 107/210 (50.95%), Query Frame = -3
Query:  216 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLHFLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISDA 839
            P  +++   AS +RL ++ I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D  E+++P        ++ YSPL +G  GGK  +EN P        P F  ENL R + +   +  +A   +   AQ+ALAW++     VV IPG + ++ L+ N+ +  I+L+ +    ++DA
Sbjct:   92 PAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENRPG-GVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNVAAADIELSAQSRDALTDA 299          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 59/212 (27.83%), Postives = 111/212 (52.36%), Query Frame = -3
Query:  201 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAH------AVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLHFLPRFKG-ENLDRNKSIYFRIENLAKKYNCTS-AQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISDAVPIEE 809
            SL++L   YID++Y H  D +  IEE +  +  LV +GK+ Y+G+S+     + +A+         P    + EW++  RD+E +IIP+C   G+ I P++ L  G     A  E  + +      L +F G    +  + +   +E +A++    S   +A+A+++ +   V PI G  K+++L  N+++L I L+ E ++ ++D VP  +
Sbjct:  138 SLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMCIHEGMAIAPWNVLCAGKIRTDAEEERRLKSGEGGRTLLQFDGWLRNETERKVSKALEKVAEEIGAKSITSVAIAYLMQKFPYVFPIVGGRKVEHLYANLEALDISLSPEQMQFLNDTVPFNK 349          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 68/213 (31.92%), Postives = 106/213 (49.77%), Query Frame = -3
Query:  219 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAH-------AVHPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS-----FLHFLPRFKGENLDRNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRI--KLTKEDLKEISD 812
            ASLKRL + Y+D+   HR D SVP+EE +    +L+++GK  Y G SE S   I  AH        + P+ A Q +++  TRD  E++++PL +  G G   +SPL  G   GK   + +P  S     F     + +            +I  +A++   T +QLALAW L        I G +K + + +N+ ++    KLT E LK+I +
Sbjct:  121 ASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV-ADQPQYNYLTRDHFEKDLLPLQQIYGYGATVWSPLKSGILTGK-YNDGIPEGSRLSTTFTSLAGQLQTPEGKTQLDQVRQISKIAEQIGATPSQLALAWTLKNPYVSTTILGASKPEQIVENVKAVEFIDKLTPEILKKIDE 331          
BLAST of CV712348 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17
Identity = 64/211 (30.33%), Postives = 104/211 (49.29%), Query Frame = -3
Query:  219 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG--KAVVENVPADSFLHFLPRFKGENLD----RNKSIYFRIENLAKKYNCTSAQLALAWVLGQGDDVVPIPGTTKMKNLDDNIDSLRIKLTKEDLKEISD 815
            E S+KRL   YIDL   HR+D   P++E +  +  +VE G ++YIG S       A        +      + Q  ++L  R+ E E+IP  +   IG++P+SP  RG          + + +D      P FK  +LD      K I  R+E ++K    + A L++AWVL +G    PI G      +D+ I +L++ LT+E++K + +
Sbjct:  132 ENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLPWSPNARGMLTRPLNQSTDRIKSD------PTFKSLHLDNLEEEQKEIINRVEKVSKDKKVSMAMLSIAWVLHKG--CHPIVGLNTTARVDEAIAALQVTLTEEEIKYLEE 333          
The following BLAST results are available for this feature:
BLAST of CV712348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
YGHZ_ECO576.708e-1926.11Uncharacterized protein yghZ OS=Escherichia coli O... [more]
YEZB_SCHPO8.760e-1931.08Uncharacterized oxidoreductase C3A11.11c OS=Schizo... [more]
PLR1_YEAST1.952e-1831.53Putative pyridoxal reductase OS=Saccharomyces cere... [more]
AAD3_YEAST2.549e-1827.96Putative aryl-alcohol dehydrogenase AAD3 OS=Saccha... [more]
YGHZ_ECOLI9.686e-1824.78Uncharacterized protein yghZ OS=Escherichia coli (... [more]
Y2320_MYCBO9.686e-1830.00Uncharacterized oxidoreductase Mb2320 OS=Mycobacte... [more]
Y2298_MYCTU9.686e-1830.00Uncharacterized oxidoreductase Rv2298/MT2355 OS=My... [more]
AAD_PHACH1.265e-1727.83Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]
KCAB_SCHPO2.158e-1731.92Putative voltage-gated potassium channel subunit b... [more]
YP088_YEAST6.278e-1730.33Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001E06_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712348 ID=CV712348; Name=CV712348; organism=Citrus sinensis; type=EST; length=847bp
GCAGATAGCCAAGTAGTAGATTGTACAGATAATTTGGCATTTATCTGCCA
TTATTTGAATAAAGTATTGCATCCCAGCCCCAAGTAAGATAGGCAGCATC
CAGAACTATTTTAAGTTCAAACCTTGCAGTCTTTTGGAGGTGTGTTTGCA
AACTTCCACGATGCTTTATCAAAGCCTTCCGGGTCTCTGTTTCCTGCTAC
CTCTTCTATGGGCACAGCGTCAGAAATTTCTTTCAGATCCTCTTTTGTAA
GTTTAATCCTCAAGGAGTCAATATTGTCATCAAGGTTTTTCATCTTAGTT
GTCCCGGGAATAGGTACGACATCATCCCCCTGTCCGAGAACCCATGCTAG
GGCTAGTTGAGCAGAAGTGCAATTGTACTTTTTGGCAAGGTTCTCTATGC
GAAAATAAATACTCTTGTTCCTGTCCAGGTTCTCTCCTTTGAACCTAGGA
AGAAAATGCAAAAAGCTATCTGCAGGTACATTCTCCACAACAGCTTTGCC
ACCGAAAAATCCACGACCAAGAGGACTGTATGGAACTATTCCAATGCCGA
GTTCCCTGCAGAGGGGTATTATCTCTTCCTCAATATCACGAGTCCAGAGG
GACCATTCCATTTGTACAGCTGTGATGGGATGAACAGCATGTGCTCTCCT
AATTGTGCCTGGGCTGGCCTCAGATAATCCAATGTACTTGATTTTACCCT
CTTCCACCAGCTTCTTCATTTCGCCAATGGTTTCCTCTATGGGGACTGAT
GTGTCCACTCTATGTTGATAATATAGATCAATGTAATCCACATCAAGGCG
CTTCAAGCTAGCTTCACAACACGAGCGCACATAATCAGGGGCACCCT
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