CV712334

Overview
NameCV712334
Unique NameCV712334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_DANRE (Translationally-controlled tumor protein homolog OS=Danio rerio GN=tpt1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.525e-22
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            M++Y+D++TGDE+ SD +  KE+ENG++ EVEGK + +   D+D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E    R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  ++  D L+  KC
Sbjct:    1 MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSG--VDIVLNHKLQE-TSYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_LABRO (Translationally-controlled tumor protein homolog OS=Labeo rohita GN=tpt1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.626e-22
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            M++Y+D++TGDE+ SD +  KE+ENG++ EVEGK + +   ++D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E   +R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  L+  D L+  KC
Sbjct:    1 MIIYKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVSG--VDIVLNHKLQE-TSYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.347e-22
Identity = 63/174 (36.21%), Postives = 97/174 (55.75%), Query Frame = -3
Query:  214 MLVYQDLL--TGDELLSDSFPYKETENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXVK-VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 714
            M V++D++  + DEL SD++P  E  NG+++EV+ K V +   V V+ GAN +               K V+++VD  RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+     K +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:    1 MRVFKDIVGYSHDELCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEEDEGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_NEUCR (Translationally-controlled tumor protein homolog OS=Neurospora crassa GN=NCU06464 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.596e-22
Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE------ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 714
            ML+Y D++TGDE++SDS+  KE + GI +EV+   + +GAV VDIGAN S               KV ++V +FRLQ    FDKK ++ Y+K ++K +   L E      E ++   K    A   +L+K  D +F+ GESM+ DG +V   Y+E  T P  +     LKE K
Sbjct:    1 MLIYSDIITGDEIISDSYDLKEVD-GIAYEVDCAMIEEGAVQVDIGANASAEEADEALDDGVV--KVNNVVHSFRLQSTQ-FDKKGYLVYLKGYMKSVKNALKEQGKSDEEIKDFETKASAFAKNVILAKFKDWEFYTGESMNPDGMVVLLNYREDGTTPYVVVWKHGLKETK 169          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_KLULA (Translationally-controlled tumor protein homolog OS=Kluyveromyces lactis GN=KLLA0C12716g PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21
Identity = 59/157 (37.58%), Postives = 90/157 (57.32%), Query Frame = -3
Query:  253 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 714
            M++Y D+++GDELLSD++  K  + G+++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  +L E   +   +F+K  +   K ++    D +FF GESM  DG LV   Y+E  T P
Sbjct:    1 MIIYTDIISGDELLSDAYDLKLVD-GVIYEADCDMVKVGGDNIDIGANPSAEDGGDDVEDGTEL--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKEIKGRLQESNPDEVSVFEKGAQAYVKKVIGSFKDWEFFTGESMDPDGMLVLLNYREDGTTP 153          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 61/171 (35.67%), Postives = 98/171 (57.31%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 714
            ML+Y+D+++GDEL+SD++  KE ++ I++E + + V V+   DVDIGANPS                V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:    1 MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMX (Translationally-controlled tumor protein homolog OS=Psetta maxima GN=tpt1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 62/173 (35.84%), Postives = 90/173 (52.02%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAV--DVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            M++Y+DLL+GDE+ S+ +  +E E GIL EVEGK + +     D   GANPS                 VDI+   +L     ++KKQ+  Y+K+++K L  KL E   ER + F     GA K +L K  D +F+ GESM+ D  +    Y+E    P  L+  D L+  KC
Sbjct:    1 MIIYKDLLSGDEMFSNIYKIRELEGGILLEVEGKRITRTEAIDDSAFGANPSAEELSEANEAAVSSG--VDIILNHKLIST-LYNKKQYSAYIKKYMKDLKTKLEETNPERVDAFVAGAVGAVKMILGKFKDFEFYTGESMNHDAMVGLLDYREDGITPIMLFFKDGLEIEKC 170          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAE (Translationally-controlled tumor protein homolog OS=Aedes aegypti GN=Tctp PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 66/173 (38.15%), Postives = 91/173 (52.60%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 714
            M +++D+ TGDE+ SD++  K  +N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKKQF TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:    1 MKIWKDIFTGDEMFSDTYKLKLVDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDNATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPVLLCFKHGLEEEK 170          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.087e-20
Identity = 66/173 (38.15%), Postives = 91/173 (52.60%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 714
            M +++D+ TGDE+ SD++  K  +N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKKQF TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:    1 MKIWKDIFTGDEMFSDTYKVKLIDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDAATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPILLCFKHGLEEEK 170          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQ--GAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            M++Y+ +++GDE+ SD+F  KE+ NGI +EV+GK   +     D  I AN S                 VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:    1 MIIYKCIISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAEETTDCTDSSVVSG--VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
The following BLAST results are available for this feature:
BLAST of CV712334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_DANRE2.525e-2235.06Translationally-controlled tumor protein homolog O... [more]
TCTP_LABRO5.626e-2235.06Translationally-controlled tumor protein homolog O... [more]
TCTP1_DICDI7.347e-2236.21Translationally-controlled tumor protein homolog 1... [more]
TCTP_NEUCR9.596e-2237.57Translationally-controlled tumor protein homolog O... [more]
TCTP_KLULA1.637e-2137.58Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHPO1.810e-2035.67Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMX1.810e-2035.84Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAE1.810e-2038.15Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL3.087e-2038.15Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA4.032e-2035.26Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712334 ID=CV712334; Name=CV712334; organism=Citrus sinensis; type=EST; length=770bp
AAACTATTTAAGTTATNTTGGTAATTCAATCTCAAACCATAAAACCCAAT
AATTAGGAGCAGAAAAACATATTGTTTATGTCAAAATAAAAACTAAAAAA
CAGCAAGCACAAGTCCCGAGTAAACCAGTACAAAAGATACATAAAAATAA
CCGCGGGCAATAATTAAAACTAGAACTACAGCAGGCACTTCCTCTTCGAA
GCCCGGCTTAGCACTTCACCTCCTTCAATGCATCAGCAATATACAAAAAT
GTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACAGCCATC
ATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCTTCGAGA
GCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCCTGCCTC
TCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCATGTATGT
TACAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCTGCAGCCTGAATGTGT
CGACAATGTCGACCACCTTCACGGCTTGGTCATCAACACCCTCATCCTCA
TCAGCTCCTTCGGCAGAAGGATTTGCACCAATGTCAACATCAACGGCTCC
TTGTACAACCCACTTTCCCTCAACTTCCCACAGAATCCCATTCTCAGTTT
CCTTGTAGGGAAAAGAGTCGGAGAGAAGCTCATCACCGGTGAGGAGATCT
TGATAGACCAACATGATTGCAGTCTCTCTCGCGAACACAAAAAAGAAAAA
TAATCAACGGAGAAAACTGG
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