CV712334

Overview
NameCV712334
Unique NameCV712334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12
Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRL-----QEQPAFDKKQFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 714
            M++Y+D+++GDE+LSD+F  KE + G+L+E +  K++ +   D+ + GANPS              V V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +    +G SM  D   V   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLWKHGLEEMK 178          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_EMENI (Translationally-controlled tumor protein homolog OS=Emericella nidulans GN=AN0641 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = -3
Query:  214 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFD---------KKQFVTYMKRFIKLLTPK-LSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 714
            M++Y+D+++GDE+LSD++  K T +G+L+E +  K++ +   D ++ GANPS              V V DI D FRL    A D         K    TYMK+ +K L  K   +E    FKK    A   +L    +    +GESM  D   +   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDTYNIK-TVDGVLYECDCRKYLKKTNEDFELEGANPSAEGGDDEGGAEGGEVMVHDIEDQFRLVWLKAEDGAKPPKDAFKGHLKTYMKKVLKALQDKGAPDETINEFKKGAPAAVNKILKNYDNYDVLMGESMDGDAMHILIDFREDGVTPYATLWKHGLEEMK 178          
The following BLAST results are available for this feature:
BLAST of CV712334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_ASPFU4.041e-1230.17Translationally-controlled tumor protein homolog O... [more]
TCTP_EMENI5.835e-1130.73Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712334 ID=CV712334; Name=CV712334; organism=Citrus sinensis; type=EST; length=770bp
AAACTATTTAAGTTATNTTGGTAATTCAATCTCAAACCATAAAACCCAAT
AATTAGGAGCAGAAAAACATATTGTTTATGTCAAAATAAAAACTAAAAAA
CAGCAAGCACAAGTCCCGAGTAAACCAGTACAAAAGATACATAAAAATAA
CCGCGGGCAATAATTAAAACTAGAACTACAGCAGGCACTTCCTCTTCGAA
GCCCGGCTTAGCACTTCACCTCCTTCAATGCATCAGCAATATACAAAAAT
GTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACAGCCATC
ATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCTTCGAGA
GCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCCTGCCTC
TCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCATGTATGT
TACAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCTGCAGCCTGAATGTGT
CGACAATGTCGACCACCTTCACGGCTTGGTCATCAACACCCTCATCCTCA
TCAGCTCCTTCGGCAGAAGGATTTGCACCAATGTCAACATCAACGGCTCC
TTGTACAACCCACTTTCCCTCAACTTCCCACAGAATCCCATTCTCAGTTT
CCTTGTAGGGAAAAGAGTCGGAGAGAAGCTCATCACCGGTGAGGAGATCT
TGATAGACCAACATGATTGCAGTCTCTCTCGCGAACACAAAAAAGAAAAA
TAATCAACGGAGAAAACTGG
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