CV712320

Overview
NameCV712320
Unique NameCV712320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712320 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = -3
Query:  196 IDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN--QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSHDRVVVCQKV--GDASVVKIIELE 762
            +DG+DA +L  E+  GLYPV+++  +  I    EK  +    L  ++  +  G  +T  E+I  S VR A ++    II  TSSG  AR+I+KYRP   ++++       + L              IV G+ P+LA  + P+ +T+   E   +VA +H    G +K  D V++   V  G +    +++L+
Sbjct:  304 LDGTDATMLSGESANGLYPVQSVQAMHDIDVRTEKELDTRNTLALQRFEEYKGSNVT--EAIGESVVRTAQELGVKTIIAATSSGYTARMISKYRPDATIVALTFDEKIQHSLG-------------IVWGVEPVLA--KKPS-NTDEMFEEAARVAKEH----GFVKDGDLVIIVAGVPFGQSGTTNLMKLQ 474          
BLAST of CV712320 vs. ExPASy Swiss-Prot
Match: KPYK2_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 34/100 (34.00%), Postives = 60/100 (60.00%), Query Frame = -3
Query:  460 DGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 759
            DG+DA++L AET  G YPVE + I+ +I  + EK  +     + T   V +   H  ++A++A   A+ + + V++ +TSSG  A  I++ RP +P+L++
Sbjct:  304 DGADAVMLSAETATGAYPVEAVEIMNRIIEKTEKHKHYRPILEATEPDVAQSPPH--AVATAAANVAVALGSPVVVAYTSSGTTAARISRARPALPILAL 401          
BLAST of CV712320 vs. ExPASy Swiss-Prot
Match: KPYK1_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 36/112 (32.14%), Postives = 64/112 (57.14%), Query Frame = -3
Query:  430 DGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHL--ESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQL 759
            DG+DA++L AE+  G +PVET+ I+ +I  + EK      +++  ++     + H    ++A++A   A+ +KA VI+ FT SG  A  I++ RP +P+L++        QL
Sbjct:  304 DGADAVMLSAESATGAFPVETVEIMSRIIEKTEK----HKFYRPILEATEPQIAHTPPHAVATAAADVALALKAPVIVAFTVSGTTASRISRARPPLPILALTPSEQTARQL 411          
The following BLAST results are available for this feature:
BLAST of CV712320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
KPYK_LACDE5.241e-1129.02Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK2_AGRVI6.845e-1134.00Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK1_AGRVI6.845e-1132.14Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001D16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712320 ID=CV712320; Name=CV712320; organism=Citrus sinensis; type=EST; length=854bp
TTTAACTAAAATATCTCTTCCCCGACTTCCAGTCTCGGGAAGTTTCATAA
TTACTAGTGCGCTTTAAATACAATTTGGCCATAATAAAAACCTGGAGATA
TACCTCACAGGTGCCAGCAACATGGTCCACCACCGTTTTCAAAAAATTAG
GACAAAATAATGCCACAAAACATGGGCAGTACAAGCATTTTAGTCTTCGA
GCTCAATAATCTTAACCACAGATGCATCGCCGACTTTCTGGCAAACAACA
ACTCGATCATGCGACTTTATAACTCCTGAAGCCTTCCCGTGATCAAGAGC
AACCTTTAGAACCGACTCATTCGTGGCATTTGTAGACTCCGCAGGATGTC
GAGGATCAGCAAGCATAGGGAAGAGACCTCTCACAATGAGTGATTGCCTT
GCCTCAAAGGCTCCACTAAAGCTCCATTTTAGTTGATTTGTCTTAAGGCG
TGGGATCACAACTGATAGAACCGGCATTGTTGGCCTGTACTTGGCAATCA
ATCTTGCAGCTCTTCCTGATGAAGTGAAGCATATAATAACAGATGCCTTC
ACTTTAATGGCTGCCCTTACCGCTGAAGATGCAATAGACTCTAAGTGGGT
CATTGGCTCTCCAACGCATTTGACGGTCTTCTTGAAATAAAGGTCCTGGT
TGAAAACCTTCTCTGCCTCAGCACAAATTTTACCAACAATAGAAATAGTT
TCTACGGGGTACAATCCACGCAGAGTCTCAGCACCAAGAAGAATCGCATC
ACTTCCATCTATATTCTCAATCTTTGCAAAAATTTGAGTTTGACTGAGGT
CACCCAACTTGGAGAGATACTCGCGAGCTTGGCGCACGTCTTCTGCATGT
CGCG
back to top