CV712304

Overview
NameCV712304
Unique NameCV712304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length462
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KPC1_NEUCR (Protein kinase C-like OS=Neurospora crassa GN=NCU06544 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.391e-11
Identity = 35/108 (32.41%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  142 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVAS--PKFNENPFKGFTY 459
            + D+   P  +  ++ S+L+ LL +E  +RLGSGP  +QEI S  +F+ INW  +  +  +P FLP++      +NF+  +T++  + +PV S   +  +  F+GF+Y
Sbjct: 1030 LADEPLYPIHMPRDSVSILQKLLTREPDQRLGSGPTDAQEIMSQPFFRNINWDDIYHKRVQPPFLPQIKSATDTSNFDSEFTSVTPVLTPVQSVLSQAMQEEFRGFSY 1137          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KS6A6_MOUSE (Ribosomal protein S6 kinase alpha-6 OS=Mus musculus GN=Rps6ka6 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.429e-11
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = -1
Query:  139 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVASPKFNENP-FKGFTYV 459
            +K K+ +P FLS+EA SLL+ L ++  + RLGS   G +E+K H +F  I+W KL  RE +P F P          F+  +T     DSP      N +  FKGF++V
Sbjct:  306 LKAKLGMPQFLSAEAQSLLRMLFKRNPANRLGSE--GVEEVKRHAFFASIDWNKLYKREVQPPFRPASGKPDDTFCFDPEFTAKTPKDSPGLPASANAHQLFKGFSFV 411          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KPCL_HUMAN (Protein kinase C eta type OS=Homo sapiens GN=PRKCH PE=1 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 4.429e-11
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = -1
Query:  133 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGS-GPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVAS---PKFNENPFKGFTYVRP 459
            + D++  P +L  +A  +LK  + K  + RLGS   GG   I  H +FK I+W +L  R+  P F P +  +  V+NF+  +     + +P+     P  N++ F+ F+YV P
Sbjct:  567 LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSP 679          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KPC1_TRIRE (Protein kinase C-like OS=Trichoderma reesei GN=pkc1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.429e-11
Identity = 34/108 (31.48%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  142 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVAS--PKFNENPFKGFTY 459
            + D+   P  +  ++ S+L+ LL +E  +RLGSGP  +QE+ S  +F+ INW  +  +  +P FLP++      +NF+  +T++  + +PV S   +  +  F+GF+Y
Sbjct: 1027 LADEPLYPIHMPRDSVSILQKLLTREPDQRLGSGPTDAQEVMSQPFFRNINWDDIYHKRVQPPFLPQIKSATDTSNFDSEFTSVTPVLTPVQSVLSQAMQEEFRGFSY 1134          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: AKT3_RAT (RAC-gamma serine/threonine-protein kinase OS=Rattus norvegicus GN=Akt3 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 4.429e-11
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = -1
Query:  190 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSP 459
            + + IK P  LSS+A SLL GLL K+ +KRLG GP   +EI  H +F  +NW+ +  ++  P F P+V  +     F+E +T   +  +P
Sbjct:  359 LMEDIKFPRTLSSDAKSLLSGLLIKDPNKRLGGGPDDPKEIMRHSFFSGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITP 448          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: SGK1_MOUSE (Serine/threonine-protein kinase Sgk1 OS=Mus musculus GN=Sgk1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = -1
Query:  118 IKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDS---------PVASPKFNENPFKGFTYVRPAASFL 447
            ++L   +++ A  LL+GLLQK+ +KRLG+      EIKSH +F +INW  L  ++  P F P V+G   + +F+  +T  P+  S           AS K     F GF+Y  P  SFL
Sbjct:  314 LQLKPNITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKSHIFFSLINWDDLINKKITPPFNPNVSGPSDLRHFDPEFTEEPVPSSIGRSPDSILVTASVKEAAEAFLGFSYAPPVDSFL 431          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: SCK2_SCHPO (Serine/threonine-protein kinase sck2 OS=Schizosaccharomyces pombe GN=sck2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  127 KIKLP-AFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPL-----------LDSPVASPKFNENPFKGFTYVRPAA 450
            K++ P   LS EA  L+K LL +    RLG+  G  +E+  H +F  I+WKKL A+E  P F P V G+  V+NF+  +TN  +             +P++S    +N FKGFTY+  +A
Sbjct:  484 KVRFPRGLLSVEARDLIKLLLNRNPKHRLGAH-GDVEEVMKHPFFDGIDWKKLAAKEISPPFKPIVEGEIDVSNFDVEFTNKAIDRDFSSTDEMSTSAPLSSTV--QNGFKGFTYIDASA 600          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: AKT2_HUMAN (RAC-beta serine/threonine-protein kinase OS=Homo sapiens GN=AKT2 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.785e-11
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = -1
Query:  190 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSP 459
            + ++I+ P  LS EA SLL GLL+K+  +RLG GP  ++E+  H++F  INW+ +  ++  P F P+V  +     F++ +T   +  +P
Sbjct:  363 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP 452          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KS6A6_HUMAN (Ribosomal protein S6 kinase alpha-6 OS=Homo sapiens GN=RPS6KA6 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = -1
Query:  139 IKDKIKLPAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVASPKFNENP-FKGFTYV 459
            +K K+ +P FLS+EA SLL+ L ++  + RLGS   G +EIK H +F  I+W KL  RE +P F P          F+  +T     DSP      N +  FKGF++V
Sbjct:  286 LKAKLGMPQFLSAEAQSLLRMLFKRNPANRLGSE--GVEEIKRHLFFANIDWDKLYKREVQPPFKPASGKPDDTFCFDPEFTAKTPKDSPGLPASANAHQLFKGFSFV 391          
BLAST of CV712304 vs. ExPASy Swiss-Prot
Match: KPC4_DROME (Putative protein kinase C delta type homolog OS=Drosophila melanogaster GN=Pkcdelta PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 7.555e-11
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = -1
Query:  133 PAFLSSEAHSLLKGLLQKEASKRLGSGPGGSQEIKSHKWFKMINWKKLEARETRPSFLPEVAGKHCVANFEECWTNMPLLDSPVAS---PKFNENPFKGFTYVRP 438
            P ++S+EA  +LKGLL+K+ +KR+GS    + +I  H +F+ I+W  LE R+  P F P+V        F+  +T   +  +P+        ++  F GFTY  P
Sbjct:  562 PVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 666          
The following BLAST results are available for this feature:
BLAST of CV712304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
KPC1_NEUCR3.391e-1132.41Protein kinase C-like OS=Neurospora crassa GN=NCU0... [more]
KS6A6_MOUSE4.429e-1137.96Ribosomal protein S6 kinase alpha-6 OS=Mus musculu... [more]
KPCL_HUMAN4.429e-1130.97Protein kinase C eta type OS=Homo sapiens GN=PRKCH... [more]
KPC1_TRIRE4.429e-1131.48Protein kinase C-like OS=Trichoderma reesei GN=pkc... [more]
AKT3_RAT4.429e-1137.78RAC-gamma serine/threonine-protein kinase OS=Rattu... [more]
SGK1_MOUSE5.785e-1136.13Serine/threonine-protein kinase Sgk1 OS=Mus muscul... [more]
SCK2_SCHPO5.785e-1136.67Serine/threonine-protein kinase sck2 OS=Schizosacc... [more]
AKT2_HUMAN5.785e-1134.44RAC-beta serine/threonine-protein kinase OS=Homo s... [more]
KS6A6_HUMAN7.555e-1138.89Ribosomal protein S6 kinase alpha-6 OS=Homo sapien... [more]
KPC4_DROME7.555e-1133.33Putative protein kinase C delta type homolog OS=Dr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D07_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712304 ID=CV712304; Name=CV712304; organism=Citrus sinensis; type=EST; length=462bp
TTATTTCCTCTCTCTTTCGGTCATAATTCAGCTACAACGAAAACAAATAT
CCAAGTTTTTCAAGAACCTGCAAACGAGGGGCTCAAAGGTCCCCTGACAA
TATCAAGTGTTCCTTTGAAGAAATGATGCCGCAGGCCTCACATAAGTAAA
CCCCTTGAACGGATTCTCATTAAATTTTGGACTGGCAACAGGAGAATCCA
GCAATGGCATGTTAGTCCAGCACTCCTCAAAGTTAGCAACACAGTGCTTG
CCAGCGACTTCAGGAAGAAAACTTGGCCTAGTTTCCCGAGCCTCCAATTT
CTTCCAATTGATCATCTTGAACCATTTGTGGGATTTTATCTCCTGACTGC
CACCTGGTCCGCTGCCAAGGCGCTTGCTTGCTTCTTTCTGCAGCAGCCCT
TTTAAAAGTGAATGTGCTTCACTTGACAAAAACGCAGGCAACTTGATCTT
ATCCTTAATCCT
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