CV712293

Overview
NameCV712293
Unique NameCV712293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCPA (Adenylosuccinate synthetase OS=Mycobacterium paratuberculosis GN=purA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52
Identity = 100/206 (48.54%), Postives = 135/206 (65.53%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +  ++G++KAYTTRVGSGPFPTE+  + G++L   G EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y+ +DG  +   P     L + +  YE L GW  DIS+ R + DLP  AR +V R+EEL G  ++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRITAVLGILKAYTTRVGSGPFPTELFDENGEYLSKTGGEFGVTTGRRRRCGWFDAVIARYATRVNGITDFFLTKLDVLSSLETVPVCVGYR-IDGARVNEMPMTQSDLHRAEPIYEELPGWWEDISAAREFDDLPAKARDYVLRLEELAGAHVSCIGVGPGREQAIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_DESHD (Adenylosuccinate synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=purA PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.019e-51
Identity = 99/207 (47.83%), Postives = 135/207 (65.22%), Query Frame = -3
Query:  180 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK*E 797
            EG+  ++ D+D GTYP+VTSS P AGG CTG G+ P  +  ++GV+KAYTTRVG GPFPTE+  + G+ +R  G EFGTTTGR RRCGW D V  +Y  +++G S   L KLDVLS   +I++ V Y+ V+   I  FP    + +  +  YEV+ GWQ DI+ +  + DLPKAA+ +V RIE+L    +  I VGPGR+  I + E
Sbjct:  220 EGAQGTLLDLDHGTYPYVTSSHPIAGGACTGAGVGPTRINRVVGVIKAYTTRVGEGPFPTELADETGELMRQNGHEFGTTTGRARRCGWFDAVIARYAVRVSGISDFALMKLDVLSGFEKIKICVGYR-VNNEVIYEFPQSQKIFKACEPVYEVIEGWQEDITGVTRFEDLPKAAQDYVRRIEQLTETQVTLIAVGPGREQTIVRGE 425          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRU0 (Adenylosuccinate synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+   M DID GTYPFVTSS+P AGG+  G G+ P  +  ++GV KAYT+RVG GPFPTE+  + GD +R  G E+GTTTGRPRR GW D V +++  +++G ++L+L  +DVLS L  +++ VAY  +DG  I  +PA L  L++ K  YE L GW  DI+ +R+  DLP+ AR +V R+ ELVGV I+   VGPGR+
Sbjct:  220 EGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELFDEVGDRIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAY-DLDGERIDYYPASLEQLKRCKPIYEELPGWSEDITGVRSLDDLPENARNYVRRVSELVGVRISTFSVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRR6 (Adenylosuccinate synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+   M DID GTYPFVTSS+P AGG+  G G+ P  +  ++GV KAYT+RVG GPFPTE+  + G+ +R  G E+GTTTGRPRR GW D V +++  +++G ++L+L  +DVLS L  +++ VAY  +DG  I  +PA L  L++ K  YE L GW  DI+ +RN  DLP+ AR +V R+ ELVGV I+   VGPGR+
Sbjct:  220 EGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAY-DLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRPN (Adenylosuccinate synthetase OS=Streptococcus pneumoniae GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+   M DID GTYPFVTSS+P AGG+  G G+ P  +  ++GV KAYT+RVG GPFPTE+  + G+ +R  G E+GTTTGRPRR GW D V +++  +++G ++L+L  +DVLS L  +++ VAY  +DG  I  +PA L  L++ K  YE L GW  DI+ +RN  DLP+ AR +V R+ ELVGV I+   VGPGR+
Sbjct:  220 EGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAY-DLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRPJ (Adenylosuccinate synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+   M DID GTYPFVTSS+P AGG+  G G+ P  +  ++GV KAYT+RVG GPFPTE+  + G+ +R  G E+GTTTGRPRR GW D V +++  +++G ++L+L  +DVLS L  +++ VAY  +DG  I  +PA L  L++ K  YE L GW  DI+ +RN  DLP+ AR +V R+ ELVGV I+   VGPGR+
Sbjct:  220 EGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAY-DLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRP2 (Adenylosuccinate synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+   M DID GTYPFVTSS+P AGG+  G G+ P  +  ++GV KAYT+RVG GPFPTE+  + G+ +R  G E+GTTTGRPRR GW D V +++  +++G ++L+L  +DVLS L  +++ VAY  +DG  I  +PA L  L++ K  YE L GW  DI+ +RN  DLP+ AR +V R+ ELVGV I+   VGPGR+
Sbjct:  220 EGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAY-DLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_FUSNU (Adenylosuccinate synthetase OS=Fusobacterium nucleatum GN=purA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51
Identity = 98/199 (49.25%), Postives = 139/199 (69.85%), Query Frame = -3
Query:  204 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 797
            EG+ + M DI++GTYP+VTSSSP+ GG+ TG G++PR +   IGV+KAYTTRVG GPF TEI G+ GD ++  G E+G  TGRPRRCGWLD+V  +Y  +ING + + +TK+DVLS L ++++  AY ++DG      PAD   L++    YE L GW  DI+ I+ Y DLP   R+++ER++E++  PI+ + VGP R
Sbjct:  219 EGAQAMMLDINYGTYPYVTSSSPTLGGVTTGAGVSPRKINKGIGVMKAYTTRVGEGPFVTEIKGEFGDKIKGIGGEYGAVTGRPRRCGWLDLVVGRYATEINGLTDIVITKIDVLSGLGKLKICTAY-EIDGKVYDYVPADTKSLDKAIPIYEELDGWDEDITQIKKYEDLPVNCRKYLERVQEILACPISVVSVGPDR 416          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_SYNWW (Adenylosuccinate synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=purA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51
Identity = 105/203 (51.72%), Postives = 132/203 (65.02%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ DID GTYP+VTSS P AGG C G GI P  +  ++GV KAYTTRVG GPFPTE+    G+ LR  GQE+GTTTGRPRRCGWLD V L+Y  +ING +   +TKLDVL     I++ VAY+   G  +  FP ++ +L+  + EY  L GWQ DIS+  +  DLP  AR +V +IEEL GV    I VGP R   I
Sbjct:  218 EGAQGTLLDIDHGTYPYVTSSHPIAGGACVGTGIGPTNISKVLGVAKAYTTRVGEGPFPTELNDFQGEILRDKGQEYGTTTGRPRRCGWLDTVILRYAVRINGLTDFAITKLDVLDSFSTIKICVAYR-YKGQLLTEFPNNIAILDDCEPEYIELPGWQEDISAASSIEDLPLNARAYVAKIEELTGVKAAIIAVGPKRKQTI 419          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_GEOBB (Adenylosuccinate synthetase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=purA PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51
Identity = 99/203 (48.77%), Postives = 137/203 (67.49%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ D+D GTYP+VTSSS  +GG CTG G++PR + ++IG+ KAY TRVGSGPFPTE+  + G+ LR AG+EFG+TTGRPRR GW D +  +Y  ++NG S + +TKLDVLS    +++  AY    G  +   PA L ++EQ    YE L GW  DI+  ++ ++LPK AR +V RIE+L G P+  + VGP RD  I
Sbjct:  222 EGAQGTLLDVDHGTYPYVTSSSTCSGGACTGSGVSPREIHEVIGISKAYATRVGSGPFPTELEDETGEQLRQAGREFGSTTGRPRRTGWYDALVARYAVRVNGLSGIAITKLDVLSGQETVKVCTAY-NYKGQVLTEVPASLEIMEQCTPIYEELPGWNDDITGAKSMAELPKNARDYVARIEKLSGAPVVLVSVGPRRDETI 423          
The following BLAST results are available for this feature:
BLAST of CV712293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PURA_MYCPA7.803e-5248.54Adenylosuccinate synthetase OS=Mycobacterium parat... [more]
PURA_DESHD1.019e-5147.83Adenylosuccinate synthetase OS=Desulfitobacterium ... [more]
PURA_STRU01.331e-5150.00Adenylosuccinate synthetase OS=Streptococcus uberi... [more]
PURA_STRR61.331e-5150.00Adenylosuccinate synthetase OS=Streptococcus pneum... [more]
PURA_STRPN1.331e-5150.00Adenylosuccinate synthetase OS=Streptococcus pneum... [more]
PURA_STRPJ1.331e-5150.00Adenylosuccinate synthetase OS=Streptococcus pneum... [more]
PURA_STRP21.331e-5150.00Adenylosuccinate synthetase OS=Streptococcus pneum... [more]
PURA_FUSNU1.331e-5149.25Adenylosuccinate synthetase OS=Fusobacterium nucle... [more]
PURA_SYNWW1.738e-5151.72Adenylosuccinate synthetase OS=Syntrophomonas wolf... [more]
PURA_GEOBB1.738e-5148.77Adenylosuccinate synthetase OS=Geobacter bemidjien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712293 ID=CV712293; Name=CV712293; organism=Citrus sinensis; type=EST; length=844bp
GCTTTGTCTCATAAAAGTTGTTATTTAAGGTATGAGTTATCAGTTAAAGA
AGTATCAACAACACGAGCAACATTTGTTAAACCAAGATGGTATTTGTCAG
CATTTGGCCATGGATGGTTTCCTTCAGAAATGAAGCTGAGAGATATAAAA
GAACAGGCGGCCTTTGGCTGTTCATTGTTTTCCTATTTAAATATGAGAGC
ATCACGTCCAGGTCCGACACCAATGTAATTTATAGGTACACCAACAAGTT
CTTCTATCCTCTCTACAAACTGACGTGCAGCCTTTGGGAGGTCTGAGTAG
TTTCTAATGGAAGAAATATCAGACTGCCATCCCAGCAGAACTTCATATTC
CACCTTCAATTGTTCAAGAAGCACAAGATCTGCAGGGAATGATTTAATTG
GTGTACCATCAACTTGTTTATAAGCAACTCCAAGCTGAATTTCTGGAAGT
TCTGATAAAACATCCAGTTTGGTGAGATTCAAAGAAGAAAAGCCGTTAAT
TTGGCAGCAGTACTTCAATGCAACTATATCAAGCCAACCACAGCGACGAG
GACGACCAGTAGTTGTGCCAAACTCTTGCCCAGCTAACCTAAGGTGGTCA
CCCCCTTGGCCCAAAATTTCCGTCGGGAAAGGACCAGAACCAACTCTCGT
AGTGTATGCTTTTACCACGCCAATTAGATCACCCACAACTCTTGGAGCAA
TGCCAAGGCCGGTGCAAATTCCGCCGGCTGATGGGCTAGAGGAAGTTACA
AATGGATAAGTTCCAAAGTCAATATCCATGGAACTGTCACTGCCTTCTAT
ATGTCATCAGACGGGTCAAATCACAACGAGTTCGATTTTGAGTT
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