CV712266

Overview
NameCV712266
Unique NameCV712266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.338e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 74/117 (63.25%), Postives = 91/117 (77.78%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EP++LVEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+  LR AT+GQAFPQ VFDHW  M+ +PL+P S+  ++VL  RKR+G+KE +    EY DKL
Sbjct:  726 EPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.209e-38
Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+  LR AT GQAFPQ VFDHW  + +DPL+P ++A ++V   RKR G+KE++    EY DKL
Sbjct:  726 EPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 5.209e-38
Identity = 76/119 (63.87%), Postives = 93/119 (78.15%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMM-SSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            LEPV+LVEIQ PEQA+GG+Y VL ++RGHVF E QRPGTPL+ IKAYLPV+ESFGF+  LRAATSGQAFPQ VFDHW+ +    PL+  S+  Q+V ++RKRKGLK ++     Y DKL
Sbjct:  726 LEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESFGFNGDLRAATSGQAFPQSVFDHWERLPGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYDKL 844          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.209e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
The following BLAST results are available for this feature:
BLAST of CV712266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
EF2_CHICK2.338e-3861.86Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_RAT3.054e-3861.86Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_PONAB3.054e-3861.86Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_PICPA3.054e-3863.25Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_MOUSE3.054e-3861.86Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU3.054e-3861.86Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_HUMAN3.054e-3861.86Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_SACKL5.209e-3864.10Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_NEUCR5.209e-3863.87Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_CALJA5.209e-3861.86Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C11_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712266 ID=CV712266; Name=CV712266; organism=Citrus sinensis; type=EST; length=871bp
TGAATGGAATAACAGAATTTGAACGTCCAAACTTAAATAAACAGAGGCTA
CAACAACAAACTCAGATAAGTCAACATTGTTTCCTTCAAAGAAAAAAACA
GAACAAAACCAAAGGCAGCAAAAAATGAATCTAGTCGCCAGCAATCGATA
ATGGCAAAAGCGCTTACAGCTTGTCTTCATATTCAGAGACGGGGGTCATC
TGTTCCTTCAAACCCTTCCTCTTCCTAATATCCAAAACAAGCTGTGAAGC
CTGGGATCCCGGCTCCAATGGATCAGATGACATCATGTCCCAGTGATCAA
ACACACATTGAGGGAATGCCTGTCCAGAGGTTGCAGCTCTCAAAGTGCTG
GAAAATCCAAAAGACTCAACGACCGGGAGGTATGCCTTGATGTTATAAAG
TGGGGTACCAGGTCTCTGCATCTCCTCAAAAACGTGACCACGTTTCTGGT
TAAGAACACTGTAAATACCACCAAGTGCCTGTTCAGGAGCTTGGATTTCC
ACCAAGTAGACAGGCTCAAGCTTGATCGCCTTGCATCTTTGCATATTGAT
TATCCAATGTTGTTTGAGCTACGTAATAATGCGGCTGAGCGGGTTTCCCA
CTGTGGAGTTCTTGAGTTTATTGCAGAGGAAGGCATGATCTATATGCCAT
ACTGGATGATGGAGAACCTGCTTTTACAAGAGGGAGATATTGTGCGAGTG
AAAAATGTGACACTTCCAAAGGGAACATATGTCAAACTTCAACCTCACAC
AAAGGACTTTCTCGATATTTCTAATCACAAAGCCATCTTGGAGACGACAT
TAAGGAATTATTCCTGCTTGACCACTGGGGACAGTATTATGGTGGCATAT
AACAATAAGAAATATTACATT
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