CV712266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35 Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = -1 Query: 167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517 EPV+LVEIQ PE A+GGIYSVLN+KRG V E QRPGTPL+ +KAYLPV ESFGF+ LR AT GQAFPQ +FDHW +MS D + S+ +V + R R GLK ++ +EY DKL Sbjct: 726 EPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: UFD1_DROME (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd1-like PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.041e-35 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = 2 Query: 521 LDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNHKAILETTLRNYSCLTTGDSIMVAYNNKKY 865 LD L L+++YPMLF+L N R SH GVLEF+A+EG Y+P+WMMENLLL EGDI+ +++V+LP T+ K QPH+ DFLDI+N KA+LE LRN++CLT GD I + YN K Y Sbjct: 50 LDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVY 164
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.195e-35 Identity = 72/117 (61.54%), Postives = 86/117 (73.50%), Query Frame = -1 Query: 167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517 EPV+LVEIQ PE A+GGIYSVLN+KRG V E QRPGTPL+ +KAYLPV ESFGFS LR AT GQAFPQ VFDHW ++S D +P S+ + R+R+GLK ++ EY DKL Sbjct: 726 EPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.046e-33 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = -1 Query: 167 MQRCKAIKLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 544 M + + I +EPV+L EIQ P GGIY VL ++RGHVFEE+ GTP+ NIK+YLPV ESFGF+ LR AT+GQAFPQCVF HW + DPL G++ +++V IR RKGL ++ Y DKL Sbjct: 741 MLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: UFD1_SCHPO (Ubiquitin fusion degradation protein 1 OS=Schizosaccharomyces pombe GN=ufd1 PE=2 SV=4) HSP 1 Score: 139.813 bits (351), Expect = 1.917e-32 Identity = 63/117 (53.85%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 521 LDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNHKAILETTLRNYSCLTTGDSIMVAYNNKKYYI 871 L++L+ L++ YPMLF+ N AAE+ +H GVLEFIAEEG +Y+PYWMM L L+ GD+VRV N + +G+YVKLQP + +FLDI++H+A+LE LRN+S LT D + YN++ Y I Sbjct: 65 LEKLSRLNVSYPMLFDFENEAAEKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQI 181
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.795e-30 Identity = 64/118 (54.24%), Postives = 90/118 (76.27%), Query Frame = -1 Query: 167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520 LEP+YLVEI APE A+GGIYSVLN++RG V E +R G+PL+++KA+LPV+ESFGF++ LR+ T+GQAFPQCVFDHW S + +A+++ L RKRKGL ++ + ++ +KL Sbjct: 724 LEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: UFD1_YEAST (Ubiquitin fusion degradation protein 1 OS=Saccharomyces cerevisiae GN=UFD1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.384e-29 Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 521 LDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNHKAILETTLRNYSCLTTGDSIMVAYNNKKYYI 871 L +L+ L+I YPMLF+L N RV+H GVLEFIAEEG +Y+P WMME L +Q G ++++ + +P G +VKL+P + DFLDIS+ KA+LE LRN+S LT D I ++YN K + I Sbjct: 55 LSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKI 171
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: UFD1_CAEEL (Ubiquitin fusion degradation protein 1 homolog OS=Caenorhabditis elegans GN=ufd-1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.204e-26 Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 521 LDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNHKAILETTLRNYSCLTTGDSIMVAY 850 L+ L +I PMLF+L N A +RV+HCGVLEF A EG +P WMM+ L L +GD +R+++ TLPK T+ KL+P + +FL+I+N KA+LE LR Y+CLT D I +Y Sbjct: 57 LNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSY 166
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: U5S1_PONAB (116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.377e-22 Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = -1 Query: 167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPG------------SQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520 +EP Y VE+QAP + +Y+VL ++RGHV ++ PG+PLY IKA++P ++SFGF + LR T GQAF VF HW ++ DPL+ A + ++ R+RKGL E ++ ++D + Sbjct: 828 MEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPM 957
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: U5S1_MOUSE (116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus GN=Eftud2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.377e-22 Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = -1 Query: 167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPG------------SQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520 +EP Y VE+QAP + +Y+VL ++RGHV ++ PG+PLY IKA++P ++SFGF + LR T GQAF VF HW ++ DPL+ A + ++ R+RKGL E ++ ++D + Sbjct: 827 MEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPM 956 The following BLAST results are available for this feature:
BLAST of CV712266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712266 ID=CV712266; Name=CV712266; organism=Citrus sinensis; type=EST; length=871bpback to top |