CX302439

Overview
NameCX302439
Unique NameCX302439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAKMDK  +H++VLVGGSTRIPKIQ LLQ++FNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEKLNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 132/189 (69.84%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFYTSITRA FE LN DLFRG L+PVEK LRDAK+DK  +H++VLVGGSTRIPKIQ LLQ+FFNGKE +KSINPDE           ILSG   E                 ETAGGVMT LI RNTTIPTK++Q F+TYSDNQPGVLIQVYEGER+MTKDNNLLGKFEL+GIPPAPRG
Sbjct:  282 IEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 130/189 (68.78%), Postives = 146/189 (77.25%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+L+EG DFYTS+TRA FE L  DLFR  L PVEKVLRDAK+DK +VHE+VLVGGSTRIP+I  L+ +FFNGKEP+KSINPDE           IL+G T EK                ETAGGVMTPLI RNTT+PTKKS++FSTYSDNQPGVLIQVYEGER+ TKDNNLLGKFEL+GIPPAPRG
Sbjct:  280 IEIDSLFEGVDFYTSLTRARFEELCQDLFRSTLEPVEKVLRDAKIDKAAVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSEKTQDLLLLDVSPLSLGIETAGGVMTPLIKRNTTVPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELAGIPPAPRG 468
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.335e-68
Identity = 132/189 (69.84%), Postives = 144/189 (76.19%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            IEID+LYEG DFY +ITRA FE +NMDLFR C+ PVEK LRDAK+DK  VHEVVLVGGSTRIPK+  LLQ+FFNGKE  KSINPDE           ILSG+ DEK                ETAGGVMT LI RNTTIPTKK Q+FSTYSDNQPGVLIQV+EGER+ TKDNNLLGKFEL+GIPPAPRG
Sbjct:  287 IEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVHQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 475
[Close]
BLAST of CX302439 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 8.655e-68
Identity = 130/189 (68.78%), Postives = 145/189 (76.72%), Query Frame = 2 
Query:    2 IEIDALYEGQDFYTSITRAMFENLNMDLFRGCLNPVEKVLRDAKMDKRSVHEVVLVGGSTRIPKIQSLLQEFFNGKEPSKSINPDEXXXXXXXXXXXILSGKTDEKXXXXXXXXXXXXXXXXETAGGVMTPLINRNTTIPTKKSQVFSTYSDNQPGVLIQVYEGERSMTKDNNLLGKFELSGIPPAPRG 568
            +EID+LYEG DFYTSITRA FE L  DLFR  L+PVEKVL+DAK+DK  V+E+VLVGGSTRIPK+Q L+ +FFNGKEP+KSINPDE           IL+G T  K                ETAGGVMT LI RNTTIPTKKS++FSTYSDNQPGVLIQVYEGER+ TKDNNLLGKFELSGIPPAPRG
Sbjct:  280 LEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVLKDAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRG 468
The following BLAST results are available for this feature:
BLAST of CX302439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_MOUSE1.022e-6869.84Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN1.022e-6869.84Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.022e-6869.84Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_DANRE1.022e-6869.84Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP7C_CRIGR1.022e-6869.84Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_CHICK1.022e-6869.84Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_BOVIN1.022e-6869.84Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP71_PUCGR1.022e-6868.78Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_SOYBN1.335e-6869.84Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP72_PICAN8.655e-6868.78Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]

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Properties
Property NameValue
Genbank descriptionC08020G05SK PhyRootSw1 Citrus sinensis cDNA clone C08020G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302439 ID=CX302439; Name=CX302439; organism=Citrus sinensis; type=EST; length=573bp
TATTGAAATAGATGCATTATATGAAGGTCAAGACTTTTACACTTCAATTA
CTCGAGCTATGTTCGAAAACTTGAATATGGACCTCTTCAGAGGCTGTTTA
AATCCCGTTGAAAAAGTACTACGAGATGCAAAGATGGACAAAAGATCAGT
CCACGAAGTAGTATTAGTAGGAGGATCAACTCGAATCCCCAAAATCCAAT
CATTATTACAAGAATTCTTCAATGGAAAAGAGCCATCAAAATCAATCAAT
CCAGATGAAGCAGTAGCATATGGAGCAGCGGTGCAAGCGGCAATTCTATC
AGGAAAAACTGACGAGAAATTAGATGAATTATTGTTATTGGACGTTGCTC
CTTTAACTCTTGGATTGGAAACTGCAGGAGGAGTGATGACTCCTTTGATC
AATCGTAACACCACTATTCCCACGAAGAAGTCGCAAGTCTTCTCTACTTA
CTCTGATAATCAACCGGGAGTATTGATTCAAGTGTACGAAGGAGAAAGGT
CGATGACGAAAGATAATAATTTGTTAGGTAAATTCGAATTGAGTGGCATT
CCACCTGCTCCTCGAGGCACTCC
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