CV712217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35 Identity = 78/158 (49.37%), Postives = 103/158 (65.19%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNILLQ+LDDGR+TD QGRTV F N VVIMTSN+GS I E + Y MK V+++ FRPEF+NRIDE +VF PL ++ I IQ+ R+ RL+++ ++ T+ A+ LG GFDP +GARP+KR IQQ +EN +A IL G + Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN------YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQQEIENPLAQQILSGKL 838
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35 Identity = 77/155 (49.68%), Postives = 108/155 (69.68%), Query Frame = -3 Query: 319 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILK 783 FNILLQ+LDDGRITDSQGR V F N +++MTSNIGS +IL + +A Y+ M+KQV++ R+ FRPEFLNRID+ I+F L E+ +IV +Q+ R++ L ++KI L + A+ + G+DP +GARP+KR IQ+ +EN IA IL+ Sbjct: 702 FNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNIGSDHILSL-----SADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILE 851
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35 Identity = 79/158 (50.00%), Postives = 103/158 (65.19%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNILLQ+LDDGR+TD QGRTV F N VVIMTSN+G+H I Q++ E Y MK+ V+ + Q FRPEF+NRIDE +VF PLD + I I IQ+ R+ RL ++ + + A+ + GFD FGARP+KR IQQ +EN +A IL G + Sbjct: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGAHLI-------QENAEITYLAMKEMVMSVVSQHFRPEFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSLFGARPLKRAIQQELENPLAQQILSGKL 837
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35 Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN+LLQ+LDDGR+TD QGRTV F N V++MTSNIGS Q +Q Y+V+K V+ + FRPEF+NRIDE +VF LD K I I IQ+ +++RL + ++ L + EA+ LL GFDP +GARP+KR IQ +EN +A AIL G Sbjct: 691 FNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGS-------QQIQAMATDDYQVIKLAVMAEVKTQFRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEALALLSEAGFDPVYGARPLKRAIQAELENPLAKAILAG 839
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35 Identity = 76/159 (47.80%), Postives = 111/159 (69.81%), Query Frame = -3 Query: 307 NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILET-LQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 780 ++ LQ+LDDGR+TDS GRTV F N V+IMTSNIGS Y+L + + +++ +E K++V+E + RPEF+NRIDE IVF+PL +E+SKI+++ + V RL ++ I + T+EA L G+DP FGARP+KR IQ+ VE +A I++G+IK Sbjct: 809 DLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYLLNIPVDADEETLNREFEKAKEKVLEELKLYMRPEFINRIDEIIVFKPLTMRELSKIIDLLIANVNKRLAERNIKIELTEEAKKELVRRGYDPAFGARPLKRTIQKYVETPLADKIIRGEIK 967
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.249e-34 Identity = 75/157 (47.77%), Postives = 108/157 (68.79%), Query Frame = -3 Query: 313 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 783 FN+LLQ+LDDGRITDSQGRT+ F N V+IMTSNIGS IL +A YE M+++V+ + FRPEFLNR+D+ I+F+ L +++ IV++Q+ R++ RL +KI L ++ A+ + G+DP +GARP+KR IQ + N +A +LKGD Sbjct: 694 FNVLLQVLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAILRL-----GGNDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARGLLKGD 845
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.131e-34 Identity = 72/158 (45.57%), Postives = 110/158 (69.62%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FN+ LQ+LDDGR+TD++G+TV F N ++IMTSNIGS Y+LE S E + + +++ V+ + F+PEFLNR+D+ I+F+PL S+ I KI++I + V++RL+++ I L T A +L G+DP +GARP+KR I ++E EIA I+ G+I Sbjct: 694 FNLFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGSGYLLEN-----KSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEI 846
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_TREDE (Chaperone protein clpB OS=Treponema denticola GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.635e-34 Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN+ LQ+LDDGR+TD QGR V F N ++IMTSNIGS YIL T + + KE + +++ R FRPEFLNRIDE + F L+ + I KIV+IQ+ V +RL+ +++ L + +A L +G+DP FGARP+KR IQ +EN++A +L+G Sbjct: 691 FNVFLQILDDGRLTDGQGRVVDFKNTIIIMTSNIGSEYIL-TAKDMGSIKEEINQIL--------RDNFRPEFLNRIDEILTFNRLEKEHIRKIVDIQLRSVAERLQARRLGLKVSDKAKDFLADIGYDPMFGARPLKRAIQAELENKLAREVLEG 837
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.635e-34 Identity = 76/156 (48.72%), Postives = 108/156 (69.23%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FNILLQ+L+DGR+TDS GRTV F N VV+MTSN+GS I Q + +EA + V++ FRPEF+NRIDE +VF+PL ++I+ I EIQ+ R++ RL ++++ L ++EA+ L +GFDP +GARP+KR IQ+ +EN +A IL G Sbjct: 687 FNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQI----QELAGDREA----QRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFDPVYGARPLKRAIQRWIENPLAQLILAG 834
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.635e-34 Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = -3 Query: 313 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 783 FNILLQ+LDDGR+TD QGRTV F N V++MTSNIGS +I + +QD YE +K+ V+E ++ FRPE +NRIDE +VF LD I I +IQ+ ++ RL+++ + L + A+ ++ GFDP +GARP+KR IQ +EN +A A+L G+ Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ--MGIQD-----YEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGN 840 The following BLAST results are available for this feature:
BLAST of CV712217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 198
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712217 ID=CV712217; Name=CV712217; organism=Citrus sinensis; type=EST; length=893bpback to top |