CV712217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.635e-34 Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = -3 Query: 313 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 783 FNILLQ+LDDGR+TD QGRTV F N V++MTSNIGS +I + +QD YE +K+ V+E ++ FRPE +NRIDE +VF LD I I +IQ+ ++ RL+++ + L + A+ ++ GFDP +GARP+KR IQ +EN +A A+L G+ Sbjct: 691 FNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ--MGIQD-----YEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGN 840
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34 Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = -3 Query: 313 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 783 FN+LLQ+LDDGR+TD QGRTV F N ++IMTSN+G+ Y L L +DS + ++ QV+E+ R FRPEFLNR+DE I+F L E+ IV+IQ+ R++ L +KI L +A L G+DP +GARP+KR IQ+ V++ +A +L+G+ Sbjct: 689 FNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTSNLGAEY-LTALGENEDS-----DAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGE 839
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34 Identity = 74/156 (47.44%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN++LQ+LDDGR+TD QGRTV FTN V+I+TSNIGS IL+ ++ Y M+++V + FRPEFLNR+DE I+F L +E+ +IV +Q+NR+++RL +K+ L + A L G+DP +GARP+KR IQ+ +E IA +IL G Sbjct: 693 FNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDL-----GGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRELETPIAKSILAG 843
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.058e-33 Identity = 76/169 (44.97%), Postives = 108/169 (63.91%), Query Frame = -3 Query: 319 VLLNSNMEL*SP--FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILK 819 V+L ME P FN+LLQ+LDDGR+TD QGRTV+FTN VV+MTSN+GS I + E M++ V + + F PEFLNRID+ ++F PL +I +IV++Q+ ++ RL + T A+ + +G+DP +GARP+KRVIQ+ V+N +A AILK Sbjct: 696 VILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGEDE-----MRQAVEDALKARFLPEFLNRIDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKRVIQREVQNPLASAILK 859
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.381e-33 Identity = 74/158 (46.84%), Postives = 109/158 (68.99%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FN+LLQ+LDDGR+TD QGRTV F N ++IMTSN+G+ Y++ L QD + ++ +V+ + R +FRPEFLNR+DE I+F L K++ +IVEIQ R++ L +KI L EA+ L G+DP +GARP+KRV+Q+ +++ +A IL G+I Sbjct: 687 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLVN-LGEDQD-----VDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDRIVEIQFKRLESLLVDRKITLSLDHEAIEWLAAKGYDPAYGARPLKRVMQKELQDPLAEKILLGEI 838
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.381e-33 Identity = 73/156 (46.79%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN+LLQ+LDDGR+TD QGRTV F N V+IMTSN+GS +I Q + Y MK V E ++ F+PEFLNRIDE +++ L ++I KIV+IQ+ +K RL ++I L + +A L G+DP +GARP+KR IQ+ +++ +A+A+L+G Sbjct: 693 FNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQWI-------QQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPLALALLEG 841
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.804e-33 Identity = 76/159 (47.80%), Postives = 104/159 (65.41%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKID-LHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNILLQ+LDDGR+TD+QGR V F N V+IMTSN+GS I + + D Y+ MKK V+ + Q FRPEF+NRIDE +VF PL K + I IQ+ + RL+++ T +A+ L +GFDP +GARP+KR+IQQ +EN ++ IL D+ Sbjct: 689 FNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSDLIQKKF-DISD-----YDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKILSDDL 841
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33 Identity = 68/159 (42.77%), Postives = 108/159 (67.92%), Query Frame = -3 Query: 307 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 783 F+ILLQ+LDDGR+TD QGRTV F N ++++TSN+GS Y+++ + K+ QV+E+ R +F+PEFLNR+D+ +VF L +E+S+I +Q+N + RL ++++ L T EA+ L G DP +GARP++R++Q + + +A IL G+IK Sbjct: 691 FDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQYLVDPTTGEAEKKQ--------QVLEVVRSSFKPEFLNRLDDLVVFSALSQEELSRIARLQINGLARRLAERRLTLEVTDEALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAREILSGEIK 841
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 72/156 (46.15%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN+LLQ+L+DGR+TDS GRTV F N V++MTSN+GS I E + + + AV + + FRPEF+NRIDE +VF+PL ++I+ I EIQ+ R++ RL ++++ L + EA+ L +G+DP +GARP+KR IQ+ +EN +A IL G Sbjct: 687 FNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAVGAH--------FRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAG 834
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 76/156 (48.72%), Postives = 103/156 (66.03%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FN LLQ+LD+GR+TD QGRTV F + V+IMTSN+GS I Q E YE MK V+E+ FRPEF+NRIDE IVF L + +I +IQ+ R++ RL+ +++ L ++A+ L LG+DP FGARP+KR IQ +EN +A A+L G Sbjct: 692 FNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMI-------QLLAEKSYEEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEEDAINQLVELGYDPLFGARPLKRAIQNYIENPLAQALLAG 840 The following BLAST results are available for this feature:
BLAST of CV712217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 198
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712217 ID=CV712217; Name=CV712217; organism=Citrus sinensis; type=EST; length=893bpback to top |