CV712217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.995e-32 Identity = 72/159 (45.28%), Postives = 104/159 (65.41%), Query Frame = -3 Query: 307 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 783 FN+LLQ+LDDGR+TD QGRTV F N +++MTSN+GS Y++ + +++QV+ + R FRPEFLNR+DE I+F L E+ +IV+IQ R+ L+ +KI L A L G+DP +GARP+KRVIQ+ V++ +A IL+G +K Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTG------AVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVK 840
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.995e-32 Identity = 70/161 (43.48%), Postives = 111/161 (68.94%), Query Frame = -3 Query: 307 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILET--LQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 783 FNILLQ+L+DGR+TDS+GR V F N V+IMTSN+G+ + + D++E Y+ MK +V+E ++ FRPEFLNRIDE IVF L+ + + IV + + +++ RLK++ + L T +A+ + GFDP +GARP++R IQ+ +E+ ++ +L+G I+ Sbjct: 630 FNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIE 790
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PARUW (Chaperone protein clpB OS=Protochlamydia amoebophila (strain UWE25) GN=clpB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.605e-32 Identity = 72/158 (45.57%), Postives = 109/158 (68.99%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNILLQ+ DDGR+TDS+GR V+ N + IMTSNIGS +LE ++ Q+ + + + + + ++ FRPEF+NR+D+ + F PL ++ KIV IQ+N + RLK + ++L +T +A+ L G+DP+FGARP+KR IQQ V N+++ AIL+G I Sbjct: 688 FNILLQVFDDGRLTDSKGRVVNCKNALFIMTSNIGSDLLLEKME--QNKQGLAKDEIMLVLDPVIKKHFRPEFINRLDDILPFVPLREHDMEKIVVIQLNLLAKRLKDRDVELMWTPQALAHLAKEGYDPHFGARPLKRYIQQEVINQLSTAILEGKI 843
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.605e-32 Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FN+LLQ+LDDGR+TD QG TV F N V+IMTSN+G+ Y++ ++ E ++ V+ + R +FRPEFLNR+DE I+F L +++ IV+IQM R++ L +KI L +A L G+DP +GARP+KRVIQ+ V++ +A IL GDI Sbjct: 687 FNVLLQVLDDGRLTDGQGHTVDFRNTVIIMTSNLGAEYLVNLGENDD------VETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGDI 838
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.402e-32 Identity = 70/156 (44.87%), Postives = 105/156 (67.31%), Query Frame = -3 Query: 316 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKG 783 FNILLQ+L+DGR+TDS GRTV F N V++MTSN+GS I E + + + AV + + FRPEF+NRIDE ++F+PL +I+ I +IQ+ R++ RL ++++ + + EA+ L +G+DP +GARP+KR IQ+ +EN +A IL G Sbjct: 687 FNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAVSTH--------FRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSG 834
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.402e-32 Identity = 69/159 (43.40%), Postives = 107/159 (67.30%), Query Frame = -3 Query: 307 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 783 FN LLQ+LDDGR+TDS GRTV F N ++IMTSNIGS Y+L+ + + V E +V+E R+ FRPEFLNR+DE ++F+PL +I++IVE+ + R++ RL ++KID+ A + +DP +GARP++R +Q +E +A ++ G+++ Sbjct: 692 FNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVRE----KVMEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELR 846
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.402e-32 Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNILLQ+LDDGRITDSQGRTV F N V+IMTSNIGS ++L+ L+ KE E++ Q+ R FRPEFLNR+DE I+F+PL + EI IV+ + ++ RL + I + T A + GFDP +GARP+KR +Q+ VE ++A ++ I Sbjct: 693 FNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLDGLEDDGSIKEESRELVMGQL----RGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIASTI 846
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.443e-32 Identity = 76/157 (48.41%), Postives = 104/157 (66.24%), Query Frame = -3 Query: 313 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGD 783 FN++LQ+LDDGR+TDSQGRTV F N ++IMTSNIGS YI E + YE + +V+E FRPEFLNRIDE I+F L ++ +IV+IQ +R++ RL +K+ L + A+ L GFDP +GARP+KR IQ+ +E IA IL+ + Sbjct: 694 FNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFE-----YGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRL-ARKMSLKLSDAALDFLA-EGFDPVYGARPLKRAIQRELETTIAKEILRSN 843
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.443e-32 Identity = 68/159 (42.77%), Postives = 107/159 (67.30%), Query Frame = -3 Query: 307 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDIK 783 FN LLQ+LDDGRITD+QGRTV F N V+IMTSNIGS ++L+ + + K ++ ++ R FRPEFLNR+D+ ++F+PL ++I +IVE+Q + ++ RL +++I + T ++ G+DP +GARP++R I VE + A+L+GD++ Sbjct: 695 FNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGEL----RGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRQRLAERRITVELTDAGREVIAHQGYDPVYGARPLRRYISHEVETLVGRALLRGDVQ 849
BLAST of CV712217 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 70/158 (44.30%), Postives = 106/158 (67.09%), Query Frame = -3 Query: 310 FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSVQDSKEAVYEVMKKQVVELARQTFRPEFLNRIDEYIVFQPLDSKEISKIVEIQMNRVKDRLKQKKIDLHYTKEAVTLLGILGFDPNFGARPVKRVIQQLVENEIAVAILKGDI 783 FNI+LQ+LD+GR+TDSQG TV F N ++++TSN+G+ ++ Q E Y+V K QV+E + F+PEFLNR+DE I+F L+ I IV+IQ+ +K L + I L + + A+ L G+DP+FGARP+KR+IQ+ ++N +A IL G++ Sbjct: 686 FNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVN-----QKEGEDTYKV-KDQVMEYVKMVFKPEFLNRLDEIILFHRLNQSNIHDIVKIQLEGLKKILSAQNIILEFDEPALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEV 837 The following BLAST results are available for this feature:
BLAST of CV712217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 198
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712217 ID=CV712217; Name=CV712217; organism=Citrus sinensis; type=EST; length=893bpback to top |