CV712206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2BE2_PSAMI (Histone H2B.2, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 74/90 (82.22%), Postives = 85/90 (94.44%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+NDIFE++A ESSRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMIIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2B2_CAEEL (Histone H2B 2 OS=Caenorhabditis elegans GN=his-4 PE=1 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 70/90 (77.78%), Postives = 84/90 (93.33%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 122
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2B1_CAEEL (Histone H2B 1 OS=Caenorhabditis elegans GN=his-11 PE=1 SV=4) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 70/90 (77.78%), Postives = 84/90 (93.33%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y +YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A E+SRLA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 121
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2B_OLILU (Histone H2B OS=Olisthodiscus luteus PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = -1 Query: 134 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 406 +ETY YI+KVLKQVHPD GIS + M IMNSFINDIFE+LA E+SRLARYNK+ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTKFTS+ Sbjct: 24 VETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2B_HOLTU (Histone H2B OS=Holothuria tubulosa PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 71/90 (78.89%), Postives = 84/90 (93.33%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KV+KQVHPD GISS+AM IMNSF+NDIFE++A E+SRLA YN+K TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYSIYIYKVMKQVHPDTGISSRAMSIMNSFVNDIFERIAAEASRLAHYNRKSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2BL1_PSAMI (Late histone H2B.2.1 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 72/90 (80.00%), Postives = 84/90 (93.33%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A E+SRLA YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2BL4_STRPU (Late histone H2B.L4 (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 71/90 (78.89%), Postives = 85/90 (94.44%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A E+SRLA+YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 17 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 106
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2BL2_PSAMI (Late histone H2B.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 71/90 (78.89%), Postives = 85/90 (94.44%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A E+SRL++YNKK TI+SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLSQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 123
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2BL1_STRPU (Late histone H2B.L1 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 71/90 (78.89%), Postives = 83/90 (92.22%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+ND+FE++A E+SRLA YNKK TITSRE+QT VRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAAEASRLAHYNKKSTITSREVQTVVRLLLPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CV712206 vs. ExPASy Swiss-Prot
Match: H2B1A_HUMAN (Histone H2B type 1-A OS=Homo sapiens GN=HIST1H2BA PE=1 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 72/90 (80.00%), Postives = 83/90 (92.22%), Query Frame = -1 Query: 134 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 403 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A E+SRLA Y+K+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126 The following BLAST results are available for this feature:
BLAST of CV712206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712206 ID=CV712206; Name=CV712206; organism=Citrus sinensis; type=EST; length=619bpback to top |