CV712201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 388 LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 636 LP MD+FV TADP E P+ NTVLS++A YP K++ Y+SDDA + T A++EA++FA W+P+C+K VEPR+P AYF Sbjct: 142 LPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = -2 Query: 388 RYENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 651 R+ DLPG+D+FV T DP E + +NT+LS++A DYP ++ + YLSDD + A++E ++FA+ W+P+C+K VEPRSP YF Sbjct: 164 RHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 251
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = -2 Query: 388 RYENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 651 R+ DLPG+D+FV T DP E + +NT+LS++A DYP ++ + YLSDD + A++E ++FA+ W+P+C+K VEPRSP YF Sbjct: 134 RHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 221
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.308e-19 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 340 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 642 + LPG+DIFV TADP E + N++LS++A DYP ++ + YLSDD+ T+ A+ EA++FA W+P+C+K +EPR P +YF+ S P+ + F+ Sbjct: 181 SSLPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEEFV 281
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 388 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 642 +DLP +D+FV TAD E PI+ +NTVLS++A +YP KL+ Y+SDD T+++L EAS+F K W P+CKK+ V R+P YF Sbjct: 90 HDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF 174
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.805e-19 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = -2 Query: 373 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPT--EKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISE 642 ++LP +D+FV TADP E P++ +NTVLS++A DYP EKL+ Y+SDD T YAL EA++FA+ W+P+C++ V R+P YF S E Sbjct: 89 DELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPE 180
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19 Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = -2 Query: 337 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLA 642 ++LPG+D+F+ T DP E I +N +LS++A DYP +K + YLSDD + L+E ++FA W+P+C+K +EPR+P +YF S P+ + FL+ Sbjct: 167 SNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLS 268
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.446e-18 Identity = 39/93 (41.94%), Postives = 64/93 (68.82%), Query Frame = -2 Query: 367 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPH 645 + LPG+D+F+ T DP E + +N++LS++A DYP ++ + YLSDD A + + LIE ++FA W+P+C+K VEPR+P +YF + + P+ Sbjct: 148 DGGLPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYFAAKAAPY 240
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.889e-18 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = -2 Query: 385 LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQ 636 LPG+D+FV TADP E + +N VLS++A DYP ++ + YLSDD+ + AL+E ++FA W+P+C+K +EPRSP +YF+ Sbjct: 167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFE 250
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.889e-18 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = -2 Query: 385 LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQ 636 LPG+D+FV TADP E + +N VLS++A DYP ++ + YLSDD+ + AL+E ++FA W+P+C+K +EPRSP +YF+ Sbjct: 167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFE 250 The following BLAST results are available for this feature:
BLAST of CV712201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712201 ID=CV712201; Name=CV712201; organism=Citrus sinensis; type=EST; length=823bpback to top |