CV712191

Overview
NameCV712191
Unique NameCV712191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.472e-34
Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 LHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYA 603
            L Y SGGQFT             + G  HSQ  E++F    G+++VA STPY+AKGL+KAAIR E+PV+  E   LY ++KE +P+E+Y  ++ +A + R G+ +T++ Y  +   V+QAA  L   G   EV+D+R+L P+D   + NS+ KT RV++V +  R     + + A I E+  D L AP + ++  D P PYA
Sbjct:  101 LRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.923e-34
Identity = 76/198 (38.38%), Postives = 125/198 (63.13%), Query Frame = 1
Query:   85 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPT-PYAGTLEEWTVVQPAQIVTAVEQLCQ 672
            HSQ +E+ F + PG+++V  STPY+AKGL+KAA+R E+PV+ FEH   Y L K  +P ++Y+  + +A++ R G+ +T++TY    +  +QAA+ L   G    V+D+R++ P D   I  +  KT +VL+V E  + G I + + A I+E+    LDAPI  L+  D+P  PYA T+E++ +V P ++  A+ +L +
Sbjct:  129 HSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKGEVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPLDKEAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAPTMEKYFMVNPDKVEAAMRELAE 326          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.280e-34
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 1
Query:    1 LHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYA 603
            L Y SGGQFT             + G  HSQ  E++F    G+++VA STPY+AKGL+KAAIR E+PV+  E   LY ++KE +P+E+Y   + +A + R G+ +T++ Y  +   V+QAA  L   G   EV+D+R+L P+D   + NS+ KT RV++V +  R     + + A I E+  D L AP + ++  D P PYA
Sbjct:  101 LRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32
Identity = 77/226 (34.07%), Postives = 125/226 (55.31%), Query Frame = 1
Query:    4 HYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 669
            +Y S GQ +              +GA+HS    S++ S PG++++   +  +A+GL+KAAIR  +PV+  E+ LLY     +   + D  +   + +A++ R G+ VTI  +S+M    ++AA+ L  +G   EVI++RS++P D  TI  S++KT+R++ VEE     G+GA +  ++ E    YLDA +  +   DVP PYAG LE   V     IV A ++ C
Sbjct:  124 NYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRAC 349          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 74/219 (33.79%), Postives = 117/219 (53.42%), Query Frame = 1
Query:    7 YTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 663
            Y  GG+               +  A+HSQ L   F  IPG+++V  STPY+ KGL+  AIR  +PVI  EH  LY L+  +P+  Y     EA +VR G+ V+I+TY  M +  ++AA TL  +G + E++D+R+L P D+ T+  S++ T R+++V+E      I   ++A + +     L A I  +     P P++ TLE+  +   AQI  A  +
Sbjct:  113 YMFGGKAETPVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIPSAAQIAAAARK 331          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32
Identity = 79/225 (35.11%), Postives = 128/225 (56.89%), Query Frame = 1
Query:    4 HYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 663
            +Y S G+                + A+HSQ   +++   PG+++V   +  +AKGL+KAAIR +NPV+  E+ +LY     + DE    +++  + +A++ R G+HVTI++YSR     ++AAK L   G   EVI++RSL+PFD  +I  S+ KTH ++ VE      GIG+ + A + E +  D LDAP++ ++  DVP PY  TLE   +     +V AV++
Sbjct:  123 YYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKK 347          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31
Identity = 77/225 (34.22%), Postives = 133/225 (59.11%), Query Frame = 1
Query:    4 HYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 663
            +Y SGG  +              + A+HSQ   +++   PG+++V+  +  +AKGL+K+AIR  NPV++ E+ L+Y +   +P E    +++  + +A++ R G HVTI+ +SR   H ++AA  L  +G + EVI++R+++P D+ TI  S+ KT+ ++ VE      G+GA + A I E    ++LDAP V ++  DVP PYA  LE+ +V Q   I+ A+++
Sbjct:  131 YYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSVPQVKDIIFAIKK 355          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.599e-31
Identity = 81/226 (35.84%), Postives = 127/226 (56.19%), Query Frame = 1
Query:    4 HYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLE---EAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 666
            HY SGG                 +GA+HSQ    ++ SIPG++++   +  +A+GL+KAAIR  NPV+  E+ LLY     I +E          +A++ R G  ++I+TY+R     ++AA+ L  K G   EVI++RS++P D   I  ++KKT+ ++ VE    + G+GA + A + E+   DYLDAPI  ++  DVPTPYA  LE++       IV AV+++
Sbjct:  137 HYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPYKAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVKEV 362          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.433e-31
Identity = 70/208 (33.65%), Postives = 118/208 (56.73%), Query Frame = 1
Query:    1 LHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 621
            + Y +GG++                   HS  LE      PG+++V  STPY+AKGL+ +AIR  +PVI  EH+ LY + ++ +P+ EY   + +A++ R G+ +TI+ Y  M +  ++AA  L  +G   EV+D+R+++P D+ TI  S++KT R ++V+E  R  GI A++ A I E     L+AP++ +++ D   P+A     W
Sbjct:  101 IRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVW 308          
BLAST of CV712191 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.433e-31
Identity = 74/220 (33.64%), Postives = 116/220 (52.73%), Query Frame = 1
Query:    7 YTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 666
            Y  GG+               +  A+HSQ L   F SIPG++ V  S PY+AKGL+ AAI   +PV  FE    YN+K  +P++ Y   L +A++ R G  VT+    +     ++AA  L  +G + EV+D RSL P D   I  S++KT+R++I++E      I   + A + +   D LDAPI  +++   P P++  LE+  +  P +IV+   +L
Sbjct:  116 YMFGGKAQVPITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMKGEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLPTPDKIVSVTLEL 335          
The following BLAST results are available for this feature:
BLAST of CV712191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ODBB_THET21.472e-3439.112-oxoisovalerate dehydrogenase subunit beta OS=The... [more]
ODBB_BACSU1.923e-3438.382-oxoisovalerate dehydrogenase subunit beta OS=Bac... [more]
ODBB_THET83.280e-3439.112-oxoisovalerate dehydrogenase subunit beta OS=The... [more]
ODPB_PEA1.800e-3234.07Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ACOB_RALEH2.350e-3233.79Acetoin:2,6-dichlorophenolindophenol oxidoreductas... [more]
ODPB_CAEEL3.070e-3235.11Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_BOVIN1.167e-3134.22Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_YEAST2.599e-3135.84Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_BACST4.433e-3133.65Pyruvate dehydrogenase E1 component subunit beta O... [more]
ACOB_BACSU4.433e-3133.64Acetoin:2,6-dichlorophenolindophenol oxidoreductas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A19_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712191 ID=CV712191; Name=CV712191; organism=Citrus sinensis; type=EST; length=715bp
CTCCACTATACTTCTGGTGGGCAGTTTACCATACCAATAGTTATCCGTGG
ACCTGGTGGAGTTGGCCGACAACTTGGAGCTGAGCATTCCCAACGCCTTG
AGTCATATTTTCAATCAATCCCCGGAATTCAAATGGTGGCATGCTCGACC
CCATACAATGCCAAGGGCTTGATGAAAGCTGCAATCCGAAGTGAGAACCC
AGTTATACTTTTCGAGCATGTGTTGCTTTACAACCTCAAGGAAAGGATTC
CAGATGAGGAATACATTTGTAATCTTGAGGAAGCTGAGATGGTTAGGCCT
GGGGAGCATGTCACTATTTTAACCTATTCTCGAATGAGGTATCATGTGAT
GCAAGCTGCTAAAACTTTGGTAAACAAAGGGTATGATCCTGAGGTTATTG
ACATCAGGTCATTGAAACCATTTGATCTTTATACCATTGGAAATTCAATT
AAAAAGACACATCGTGTACTGATTGTGGAGGAGTGCATGCGGACTGGTGG
AATTGGTGCTAGTTTAACTGCAGCTATCACTGAGAATTTCCATGATTACT
TGGATGCTCCTATTGTATGCTTATCATCACAGGACGTGCCAACTCCATAT
GCCGGCACGTTGGAGGAATGGACTGTGGTTCAACCTGCCCAGATTGTGAC
AGCAGTTGAGCAGCTTTGCCAATAGTTTTTGAATACCGAAGTGTCATAAC
CGAATCTATCTATGC
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