CV712172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 136 WSPEEDEALQQLVQKHGPRNWSLISKSIPG---RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHW 408 W PEED L V+++GPR WSL+S+ + R KSC RW N L P ++ + T +E ++IR A+ GNKW IA + GRT + W Sbjct: 12 WRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 105
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.526e-13 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 136 WSPEEDEALQQLVQKHGPRNWSLISKSIP---GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHW 408 WS EED L+ V++ GPR W L+S+ + R KSC RW N L P ++ + T EE ++IR + GNKW IA + GRT + W Sbjct: 7 WSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWW 100
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: CEF1_CANAL (Pre-mRNA-splicing factor CEF1 OS=Candida albicans GN=CEF1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 130 GPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLN 375 G W+ EDE L+ +QK+G W IS +P +S K + RW LSP + +T EEDE ++ H F N+W +I+ +LN Sbjct: 10 GVWTNVEDEILKAAIQKYGIYQWERISSLLPKKSAKQVKARWVEYLSPLLNKTDWTKEEDEKLLNLHKIFPNQWRSISNILN 91 The following BLAST results are available for this feature:
BLAST of CV712172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712172 ID=CV712172; Name=CV712172; organism=Citrus sinensis; type=EST; length=754bpback to top |