CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11376 contig Csv1_Contig11376:896..1571. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33
Identity = 73/165 (44.24%), Postives = 109/165 (66.06%), Query Frame = 1
Query:  178 SYSIADLQMATGSFNVENLLGGGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +++  +L  AT +F+ +  LG G FGRVY+ +  + G+V+AVK++D + L      +F+  V  +S LHHPN++ L+GYC++  Q LLVYEF   GSL D LH    D + L WN R+KIA G A+ LE+LH+  +  V++++ KS+NILLD   +P+LSD GLA
Sbjct:   73 TFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNR--EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLA 235          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  184 SIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            S+ +L  +T +F+  N++G G FG VY+A F DG   AVK++       +M  +F   V  +S+  H N++ L GYC      LL+Y F +NGSL  +LH   + N  LIW+ R+KIA G AR L YLH+VC  +V+H+++KS+NILLD +    L+D GLA
Sbjct:  743 SVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDC--GQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLA 902          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.251e-31
Identity = 70/170 (41.18%), Postives = 112/170 (65.88%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDD---FIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSD--EDNKPLI--WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S ++L  ATG+F++EN +G G+FG VYR +  DG+ +A+K+ + +A   +  +    F   ++ +S+LHH +++ LVGYC E  + LLVY++ KNG+L+D LH  +  E +  LI  W  R+KIAL  AR +EYLH      ++H++IKS+NILLD+    ++SD GL+
Sbjct:  484 FSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLS 653          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31
Identity = 67/165 (40.61%), Postives = 106/165 (64.24%), Query Frame = 1
Query:  178 SYSIADLQMATGSFNVENLLGGGTFGRVYRAQFAD-GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +++  +L  ATG+F  +  LG G FG+V++       +V+A+K++D + +      +F+  V  +S   HPN+++L+G+C+E  Q LLVYE+   GSL D LH+     KPL WN+R+KIA G AR LEYLH+  +  V+++++K +NILL  +  P+LSD GLA
Sbjct:   90 TFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQG--IREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLA 252          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.806e-30
Identity = 66/162 (40.74%), Postives = 102/162 (62.96%), Query Frame = 1
Query:  184 SIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            + ADL  AT  F+ ++L+G G FG VY+A   DG  +A+KK+   +   +   +F+  +  I ++ H N++ L+GYC    + LLVYEF K GSL D LH   +    L W++R KIA+G+AR L +LH  CS  ++H+++KS+N+LLD  L  ++SD G+A
Sbjct:  872 TFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDR--EFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMA 1031          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 1
Query:  178 SYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            ++++  ++ AT  FN  N +G G FG V++   ADG+V+AVK++ S +       +F+  +  IS L HPN+++L G+C E  Q LL YE+ +N SL   L        P+ W +R KI  G A+ L +LHE   L  VH++IK+ NILLD +L P++SD GLA
Sbjct:  668 TFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNR--EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLA 829          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 67/164 (40.85%), Postives = 103/164 (62.80%), Query Frame = 1
Query:  178 SYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            S+++  ++ AT +F+ EN +G G FG VY+   ADG  +AVK++ S +       +F+  +  IS L HPN+++L G C E  + LLVYE+ +N SL   L  +++    L W++R KI +G A+ L YLHE   L +VH++IK+ N+LLD  LN ++SD GLA
Sbjct:  656 SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR--EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLA 817          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +++ DL++AT  F   N+LG G +G VYR +  +G  +AVKK+ ++   +E   +F   V  I  + H N++ L+GYC E    +LVYE+  +G+L  +LH +   +  L W +R+KI  GTA+AL YLHE     VVH++IK++NIL+D+E N +LSD GLA
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEK--EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLA 331          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S+ +LQ+AT SF+ +N+LG G FG+VY+ + ADG ++AVK++     P      F   V  IS   H N++ L G+C    + LLVY +  NGS+   L        PL W+ R +IALG+AR L YLH+ C   ++H+++K+ANILLD E    + D GLA
Sbjct:  293 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 454          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29
Identity = 64/167 (38.32%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +V  Y+  +L  AT SF+  + +G G +G+VY+     G V+AVK+ +  +L  +   +F   +  +S+LHH N++ L+GYC + G+ +LVYE+  NGSL D L  S    +PL    R++IALG+AR + YLH      ++H++IK +NILLD+++NP+++D G++
Sbjct:  615 SVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQK--EFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDAL--SARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGIS 777          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
PBS1_ARATH3.289e-3344.24Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PSKR2_ARATH1.058e-3142.59Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
ACCR3_ARATH5.251e-3141.18Putative serine/threonine-protein kinase-like prot... [more]
RLCK7_ARATH8.957e-3140.61Probable serine/threonine-protein kinase RLCKVII O... [more]
BRI1_ARATH5.806e-3040.74Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
RKF1_ARATH7.583e-3040.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.293e-2940.85Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH1.293e-2941.72Probable receptor-like protein kinase At2g42960 OS... [more]
SERK2_ARATH1.293e-2941.10Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5374_ARATH1.689e-2938.32Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
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