CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.791e-24
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 1
Query:  196 LQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +Q AT  F   N +G G FG VY+   +DG  +AVK++  S+   E+  +F   V  +++L H N++ L+G+C +  + +LVYE+  N SL  FL         L W  R KI  G AR + YLH+   L+++H+++K++NILLD ++NP+++D G+A
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEV--EFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFL-FDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMA 484          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.791e-24
Identity = 56/157 (35.67%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  205 ATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH--LSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            AT  F+  +++G G FG V++A   DG  +A+KK+   +   +   +F+  +  + ++ H N++ L+GYC    + LLVYEF + GSL + LH   + E  + L W  R KIA G A+ L +LH  C   ++H+++KS+N+LLD ++  ++SD G+A
Sbjct:  834 ATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDR--EFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMA 988          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.645e-24
Identity = 57/165 (34.55%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVL-AVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDE-DNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +SI +++ AT  F  + ++G G FG VY+ +   G  L AVK+++ ++  ++   +F   +  +S+L H +++ L+GYC +  + +LVYE+  +G+L D L   D+  + PL W  R++I +G AR L+YLH     +++H++IK+ NILLD     ++SD GL+
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITS--NQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLS 675          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.645e-24
Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSA------LPSEMCDDFIEMVSNIS---QLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            N+  Y+  DL+ AT +F  +++LG G FG+VYR  + D   LA  ++ S        L SE    F E  S ++    L H N+++L+GYC E  + LLVYEF   GSL   L      N P  W+ R+KI +G AR L +LH +    V++++ K++NILLD+  + +LSD GLA
Sbjct:   70 NLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRG-WVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLF---RRNDPFPWDLRIKIVIGAARGLAFLHSL-QREVIYRDFKASNILLDSNYDAKLSDFGLA 240          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.645e-24
Identity = 53/163 (32.52%), Postives = 100/163 (61.35%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S+++++  T +F+  N++G G FG+VY+     G  +A+KK + ++   +  ++F   +  +S+L H +++ L+GYC E G+  L+Y++   G+L +  HL +     L W  R++IA+G AR L YLH     +++H+++K+ NILLD     ++SD GL+
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKKSNPNS--EQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLRE--HLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLS 667          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 57/169 (33.73%), Postives = 100/169 (59.17%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNK----PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 675
            +   +LQ AT +F+   + G G FG+VY  +   G  +A+K+   S+   +  ++F   +  +S+L H +++ L+G+C E  + +LVYE+  NG L D L+ S E++      L W  R++I +G+AR L YLH   +  ++H+++K+ NILLD  L  ++SD GL+ +
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSS--EQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKD 679          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  205 ATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            ATG+FN  NL+G G FG  Y+A+ +   V+A+K++            F   +  + +L HPN++ L+GY +   +  LVY +   G+L  F+    ++     W    KIAL  ARAL YLH+ C   V+H+++K +NILLD++ N  LSD GLA
Sbjct:  870 ATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQG--VQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFI----QERSTRDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLA 1018          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  205 ATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYC--SEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            AT + N + ++G G  G +Y+A  +  KV AVKK+  + + +      +  +  I ++ H N+++L  +    EYG  L++Y + +NGSLHD LH ++   KPL W++R  IA+GTA  L YLH  C  ++VH++IK  NILLD++L P +SD G+A
Sbjct:  812 ATENLNDKYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVS-MVREIETIGKVRHRNLIKLEEFWLRKEYG--LILYTYMENGSLHDILHETNPP-KPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIA 964          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 57/160 (35.62%), Postives = 94/160 (58.75%), Query Frame = 1
Query:  193 DLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH-LSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            DL +AT  F    ++G G FG V++ +  +   +AVKKI  S+   +   +F+  + ++ +L H N++ L G+C      LL+Y++  NGSL   L+ +       L WN+R +IA G A  L YLHE     V+H+++K +N+L+D+++NP+L D GLA
Sbjct:  359 DLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSS--RQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLA 516          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  226 ENLLGGGTFGRVYRAQFADGKVLAVKKI-DSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDN--KPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +N++G G  G VYR +   G+ LAVKK+   +   +E    F   V  + ++ H NI++L+  C+      LVYEF +NGSL D LH   E     PL W +R  IA+G A+ L YLH      +VH+++KS NILLD+E+ P+++D GLA
Sbjct:  689 DNIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLA 839          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
CRK10_ARATH2.791e-2437.34Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
BRL2_ARATH2.791e-2435.67Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5389_ARATH3.645e-2434.55Probable receptor-like protein kinase At5g38990 OS... [more]
CX32_ARATH3.645e-2438.64Probable serine/threonine-protein kinase Cx32, chl... [more]
ANX2_ARATH3.645e-2432.52Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5613_ARATH4.760e-2433.73Probable receptor-like protein kinase At5g61350 OS... [more]
RPK2_ARATH4.760e-2437.42LRR receptor-like serine/threonine-protein kinase ... [more]
RPK1_IPONI4.760e-2438.85Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
LRKA1_ARATH4.760e-2435.63Lectin-domain containing receptor kinase A4.1 OS=A... [more]
HSL2_ARATH6.217e-2440.40LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
back to top