CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11376 contig Csv1_Contig11376:896..1571. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.095e-28
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S+ +LQ+A+  F+ +N+LG G FG+VY+ + ADG ++AVK++     P      F   V  IS   H N++ L G+C    + LLVY +  NGS+   L        PL W +R +IALG+AR L YLH+ C   ++H+++K+ANILLD E    + D GLA
Sbjct:  290 FSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 451          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.095e-28
Identity = 65/165 (39.39%), Postives = 104/165 (63.03%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 675
            + +++L+ AT  F   N LG G+FG VY+A  +DG  +AVK+ +++ +       F   +  + ++ H NI+ L+GYCSE G+ LLVYE+  +G+LHD LH    D   L W+ R+KI L  AR L+YLH      ++H+++K++NILLD E+  +++D GL S+
Sbjct:  507 FRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSS 668          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28
Identity = 63/168 (37.50%), Postives = 103/168 (61.31%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDN-KPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +V+   ++DL  AT  F  +N++  G  G +Y+ +  DG +L +K++  S    +   +F   +  +  + + N++ L+GYC    + LL+YE+  NG L+D LH +DE++ KPL W SR+KIA+GTA+ L +LH  C+  ++H+NI S  ILL  E  P++SD GLA
Sbjct:  287 SVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRSEK---EFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLA 451          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.439e-28
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S+ +LQ+A+ +F+ +N+LG G FG+VY+ + ADG ++AVK++            F   V  IS   H N++ L G+C    + LLVY +  NGS+   L    E   PL W  R +IALG+AR L YLH+ C   ++H+++K+ANILLD E    + D GLA
Sbjct:  277 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 438          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28
Identity = 67/163 (41.10%), Postives = 99/163 (60.74%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            Y++ +L+ AT     EN++G G +G VYR    DG  +AVK + ++   +E   +F   V  I ++ H N++ L+GYC E    +LVY+F  NG+L  ++H    D  PL W+ R+ I LG A+ L YLHE     VVH++IKS+NILLD + N ++SD GLA
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK--EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLA 302          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 1
Query:  184 SIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            S+ D+  +T SFN  N++G G FG VY+A   DG  +A+K++       +M  +F   V  +S+  HPN++ L+GYC+     LL+Y +  NGSL  +LH   +    L W +R++IA G A  L YLH+ C   ++H++IKS+NILL +     L+D GLA
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDT--GQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLA 891          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28
Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            N+ S++  +L +AT  F+ +++LG G FG VYR +F DG V+AVK++      S     F   +  IS   H N++ L+GYC+   + LLVY +  NGS+   L       KP + WN+R KIA+G AR L YLHE C   ++H+++K+ANILLD      + D GLA
Sbjct:  283 NLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGN-SQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKA-----KPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLA 444          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 1
Query:  190 ADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH-----LSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 672
            ++L+ AT  F   +L+G G++GRVY     +    A+KK+DS+  P    ++F+  VS +S+L H N ++L+GYC +    +L YEF  NGSLHD LH        +    L W  RVKIA+G AR LEYLHE  +  ++H++IKS+N+LL  +   +++D  L++
Sbjct:   64 SELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPD---NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSN 226          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNK-PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            ++  +L+ A   F  E+++G G+F  VY+    DG  +AVK+   S+   +  ++F   +  +S+L+H +++ L+GYC E G+ LLVYEF  +GSLH+ LH  ++  K  L W  RV IA+  AR +EYLH      V+H++IKS+NIL+D E N +++D GL+
Sbjct:  500 FTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLS 663          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28
Identity = 64/172 (37.21%), Postives = 105/172 (61.05%), Query Frame = 1
Query:  172 VTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH-----LSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 672
            + S ++ +L    G+F  + L+G G++GRV+  +F  G+ +A+KK+D+S+   E   DF   +S +S+L H + +EL+GYC E    +L+Y+F   GSLHD LH        E    L WN RVKIA G A+ LE+LHE     +VH++++S+N+LL ++   +++D  L +
Sbjct:   58 IPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASS-SEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTN 227          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
SERK1_ARATH1.095e-2839.88Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
ACCR2_ARATH1.095e-2839.39Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5838_ARATH1.868e-2837.50Probably inactive leucine-rich repeat receptor-lik... [more]
BAK1_ARATH2.439e-2839.88BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y1154_ARATH3.186e-2841.10Probable serine/threonine-protein kinase At1g01540... [more]
PSKR1_DAUCA3.186e-2838.89Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y2239_ARATH5.434e-2840.48Probable LRR receptor-like serine/threonine-protei... [more]
Y2706_ARATH7.097e-2839.16Probable receptor-like protein kinase At2g47060 OS... [more]
ACR4_ARATH7.097e-2839.02Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y2197_ARATH9.269e-2837.21Probable protein kinase At2g41970 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
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