CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11376 contig Csv1_Contig11376:896..1571. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  196 LQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ-------LHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 627
            L++      +E ++G G FG+VYRA +A G  +AVK     A   +  +D  + + N+ Q       L HPNI+ L G C +     LV EF + G L+  L       K +  +  V  A+  AR + YLH+   + ++H+++KS+NIL+
Sbjct:  130 LEIDFAELTLEEIIGIGGFGKVYRAFWA-GDEVAVK-----AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 269          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y9851_DICDI (Probable serine/threonine-protein kinase DDB_G0275165 OS=Dictyostelium discoideum GN=DDB_G0275165 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 46/154 (29.87%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  217 FNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPS--EMCDDFIEM-VSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            F+  +++G G FG+VY+    +GK + +KKI  S      ++   F+E  +  +  L HPN+++  G   +     L+ E    G LH ++     D   + W  +VKIA   A ++ YLHE     V+H+++KS N+L+      ++ D GLA
Sbjct:   23 FDPLSIIGSGGFGKVYQGVL-NGKEIGIKKITISDNDPNRDILLKFLEREIYTLKMLSHPNVIKFYGIAEKERSLFLLTELVSGGDLHWYIKNKSID---ITWKLKVKIARDIAASMAYLHE---NGVIHRDLKSTNLLVAENWVIKVCDMGLA 169          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 43/145 (29.66%), Postives = 78/145 (53.79%), Query Frame = 1
Query:  235 LGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +G G F  V+   +  G  +A+KK+       +  + FI  V N+ + +H NI+  +G C  Y    ++ E+   GSL++ LH  +     + ++  + + + T  AL  LH + S+++VH+++ S NILLD   N ++SD GL+
Sbjct:  859 VGEGAFSEVWEGWWK-GIHVAIKKLKIIGDEEQFKERFIREVQNLKKGNHQNIVMFIGAC--YKPACIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLH-LHSITIVHRDLTSQNILLDELGNIKISDFGLS 999          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PLK4_BOVIN (Serine/threonine-protein kinase PLK4 OS=Bos taurus GN=PLK4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 50/154 (32.47%), Postives = 75/154 (48.70%), Query Frame = 1
Query:  217 FNVENLLGGGTFGRVYRAQ-FADGKVLAVKKIDSSAL-PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 672
            F V NLLG G+F  VYRA+    G  +A+K ID  A+  + M       V    QL HP+I+EL  Y  +     LV E   NG ++ +L       KP   N            + YLH   S  ++H+++  +N+LL   +N +++D GLA+
Sbjct:   12 FRVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDNNYVYLVLEMCHNGEMNRYL---KNRRKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLAA 159          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: LMTK2_HUMAN (Serine/threonine-protein kinase LMTK2 OS=Homo sapiens GN=LMTK2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 1
Query:  199 QMATGSFNVENLLGGGTFGRVYRAQFADGKVLA---VKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFL-----HLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 666
            Q+A  S N    +G G FG+V   +   G  +A   VK++ +SA P E  D F++       L HPNI++ VG C E   +LLV+EF   G L  +L     H+  +    L+     ++A G A A+  LH       +H ++   N  L ++LN ++ D G+
Sbjct:  131 QVARHSLNYIQEIGNGWFGKVLLGEIYTGTSVARVIVKELKASANPKEQ-DTFLKNGEPYYILQHPNILQCVGQCVEAIPYLLVFEFCDLGDLKAYLRSEQEHMRGDSQTMLLQRMACEVAAGLA-AMHKLH------FLHSDLALRNCFLTSDLNVKVGDYGI 286          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: LIMK2_MOUSE (LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 42/147 (28.57%), Postives = 76/147 (51.70%), Query Frame = 1
Query:  232 LLGGGTFGRVYRAQF-ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +LG G FG+  +    A GKV+ +K++       E    F+  V  +  L HPN+++ +G   +  +  L+ E+ + G+L DFL   D    P  W  +V+ A G +  + YLH +C   ++H+++ S N L+  +    ++D GL+
Sbjct:  336 VLGKGFFGQAIKVTHKATGKVMVMKEL--IRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSVD----PFPWQQKVRFAKGISSGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLS 473          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: PLK4_XENLA (Serine/threonine-protein kinase PLK4 OS=Xenopus laevis GN=plk4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
Query:  217 FNVENLLGGGTFGRVYRAQFAD-GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLH----HPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS 672
            F V NLLG G+F  VYRAQ  + G  +A+K ID  A+        ++ V N  ++H    HP+I+EL  Y  +     L+ E   NG ++ +L       KP   +            + YLH   S  ++H+++  +N+LL +++N +++D GLA+
Sbjct:   12 FKVLNLLGKGSFACVYRAQSINTGIDVAIKMIDKKAMQKV---GMVQRVRNEVEIHCQLKHPSILELYNYFEDSNYVYLILEMCHNGEVNRYL---KNRKKPFAEDEARHFMHQIVTGMLYLH---SHGILHRDLTLSNLLLSSDMNIKIADFGLAT 159          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 1
Query:  196 LQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQ-------LHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 627
            L++      +E ++G G FG+VYRA F  G  +AVK     A   +  +D  + + N+ Q       L HPNI+ L G C +     LV EF + G L+  L       K +  +  V  A+  AR + YLH+   + ++H+++KS+NIL+
Sbjct:  137 LEIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVK-----AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 276          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
M3K9_MOUSE4.622e-1131.79Mitogen-activated protein kinase kinase kinase 9 O... [more]
Y9851_DICDI6.036e-1129.87Probable serine/threonine-protein kinase DDB_G0275... [more]
PYK2_DICDI6.036e-1129.66Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
PLK4_BOVIN6.036e-1132.47Serine/threonine-protein kinase PLK4 OS=Bos taurus... [more]
LMTK2_HUMAN6.036e-1131.10Serine/threonine-protein kinase LMTK2 OS=Homo sapi... [more]
LIMK2_MOUSE6.036e-1128.57LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 ... [more]
PLK4_XENLA7.883e-1130.57Serine/threonine-protein kinase PLK4 OS=Xenopus la... [more]
M3K9_HUMAN7.883e-1131.79Mitogen-activated protein kinase kinase kinase 9 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
back to top