CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11376 contig Csv1_Contig11376:896..1571. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 57/162 (35.19%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  184 SIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFL-HLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL 666
            SI  L+  T +F+ +N+LG G FG VY+ +  DG  +AVK++++  +  +   +F   ++ ++++ H +++ L+GYC +  + LLVYE+   G+L   L   S+E  KPL+W  R+ +AL  AR +EYLH +   S +H+++K +NILL +++  +++D GL
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 738          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +   ++  AT  F+  +LLG G FGRVY+    DG  +AVK+   +    +   +F   +  +S+L H +++ L+GYC E  + +LVYE+  NG L    HL   D  PL W  R++I +G AR L YLH   S S++H+++K+ NILLD  L  +++D GL+
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR--GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS--HLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLS 656          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 60/161 (37.27%), Postives = 99/161 (61.49%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 663
            +S  +L+ AT +F+V+ +LG G+ G VY+    DGK++AVK+  S  +  +  + FI  +  +SQ++H NI++L+G C E    +LVYE+  NG +   LH  + D+  + W  R++IA+  A AL Y+H   S  + H++IK+ NILLD +   ++SD G
Sbjct:  420 FSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKR--SKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLH-DESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFG 577          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 63/159 (39.62%), Postives = 102/159 (64.15%), Query Frame = 1
Query:  196 LQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            L+ AT +F+ EN LG G FG VY+  F+ G+ +AVK++  ++   +   +F   +  +++L H N++ L+G+C E  + +LVYEF KN SL +F+   D   + L+ W  R K+  G AR L YLHE     ++H+++K++NILLD E+NP+++D GLA
Sbjct:  354 LKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGD--SEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIF--DLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLA 508          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 65/168 (38.69%), Postives = 103/168 (61.31%), Query Frame = 1
Query:  166 TNVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            T+   +  + LQ AT  F++EN LG G FG VY+   +DG+ +AVK++  +A   E   +F      +++L H N+++L+GY  E  + LLVYEF  + SL  F+    + N+ L W  R KI  G AR L YLH+   L ++H+++K++NILLD E+ P+++D G+A
Sbjct:  327 TDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGET--EFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNE-LEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMA 491          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 69/177 (38.98%), Postives = 105/177 (59.32%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQF----------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            N+ +++  +L+ AT +F  ++LLG G FG V++               G V+AVKK+ +         +++  V+ + QL HPN+++LVGYC E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LH+  S  V++++ K+ANILLD E N +LSD GLA
Sbjct:   67 NLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHK--EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKS-QVIYRDFKAANILLDAEFNSKLSDFGLA 238          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 63/164 (38.41%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVK-KIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +S  +++ AT +F  + ++G G+FG VYR +  DGK +AVK + D + L +   D FI  V  +SQ+ H N++   G+C E  + +LVYE+   GSL D L+        L W SR+K+A+  A+ L+YLH      ++H+++KS+NILLD ++N ++SD GL+
Sbjct:  596 FSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGA---DSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLS 754          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 64/167 (38.32%), Postives = 102/167 (61.08%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            +V  +++  ++ AT  +  + L+G G FG VYR    DG+ +AVK   S++  ++   +F   ++ +S + H N++ L+GYC+EY Q +LVY F  NGSL D L+      K L W +R+ IALG AR L YLH     SV+H+++KS+NILLD  +  +++D G +
Sbjct:  582 SVKPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTS--TQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFS 744          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26
Identity = 71/169 (42.01%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL-LVYEFRKNGSLHDFLHLSDEDNK-PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            N  SY+  ++ + T +F  E  LG G FG VY     D + +AVK +  S+  ++    F   V  + ++HH N++ LVGYC E GQHL L+YE+  NG+L    HLS E+++ PL W +R++IA  TA+ LEYLH  C   ++H++IKS NILLDN    +L D GL+
Sbjct:  577 NKRSYTYEEVAVITNNF--ERPLGEGGFGVVYHGNVNDNEQVAVKVLSESS--AQGYKQFKAEVDLLLRVHHINLVTLVGYCDE-GQHLVLIYEYMSNGNLKQ--HLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLS 738          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26
Identity = 61/156 (39.10%), Postives = 101/156 (64.74%), Query Frame = 1
Query:  205 ATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            AT  F+ EN +G G FG VY+ +   G+ +AVK++   +   E+  +F   V  +++L H N+++L+G+C+E  + +LVYEF  N SL  F+   DE+ + L+ W+ R +I  G AR L YLHE   L ++H+++K++NILLD  +NP+++D G+A
Sbjct:  335 ATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEI--EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF--DEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMA 486          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
TMK1_ARATH2.283e-2635.19Probable receptor protein kinase TMK1 OS=Arabidops... [more]
THE1_ARATH2.283e-2637.42Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
WAKLE_ARATH2.982e-2637.27Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
CRK28_ARATH2.982e-2639.62Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK26_ARATH2.982e-2638.69Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
APK2B_ARATH2.982e-2638.98Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5487_ARATH3.894e-2638.41Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR3.894e-2638.32Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y4245_ARATH5.086e-2642.01Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH5.086e-2639.10Cysteine-rich receptor-like protein kinase 38 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
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